RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ENAHQ8N8S7 591 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 SNX33Q8WV41 574 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 PGBD4Q96DM1 585 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 CYFIP2Q96F07 1278 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 DNAI1Q9UI46 699 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 DAAM1Q9Y4D1 1078 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 PCDHA13Q9Y5I0 950 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 NR2E3Q9Y5X4 410 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 MYOCOSA0A1B0GUC4 107 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZNF503-AS2A6NEH8 195 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 N4BP3O15049 544 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 GAAP10253 952 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZKSCAN1P17029 563 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 RPL17P18621 184 aaKnown RBP6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 POLD1P28340 1107 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 SERPINB3P29508 390 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 ECHS1P30084 290 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 NCKAP1LP55160 1127 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 WNT3AP56704 352 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 FOXO4P98177 505 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 NOGQ13253 232 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 KRT72Q14CN4 511 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZRSR2Q15696 482 aaKnown RBP6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 LONRF1Q17RB8 773 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 TAS1R1Q7RTX1 841 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 SRLQ86TD4 932 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 IGDCC3Q8IVU1 814 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 IFNL2Q8IZJ0 200 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 GFM2Q969S9 779 aaKnown RBP6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 MTFMTQ96DP5 389 aaKnown RBP6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 SAMD11Q96NU1 681 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 SYT3Q9BQG1 590 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 BTBD1Q9H0C5 482 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 EPB41L4BQ9H329 900 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 PLCB1Q9NQ66 1216 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 TDP1Q9NUW8 608 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 CROTQ9UKG9 612 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
HMGB1P46-201ENST00000520062 PAPLNO95428 1278 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 ITGB5P18084 799 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 ADCY8P40145 1251 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 ETV4P43268 484 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 RAB1AP62820 205 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 RAB39AQ14964 217 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 CCDC157Q569K6 752 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 TRIM68Q6AZZ1 485 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 SWSAP1Q6NVH7 229 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 RHOT1Q8IXI2 618 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 PARD3BQ8TEW8 1205 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 ZNF480Q8WV37 535 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 SELENOOQ9BVL4 669 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 BCO1Q9HAY6 547 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 MAGEL2Q9UJ55 1249 aa6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 OAS3Q9Y6K5 1087 aaKnown RBP6.61□□□□□ -1.35
HMGB1P46-201ENST00000520062 CFAP69A5D8W1 941 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 FOXN3O00409 490 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 DAPK3O43293 454 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 PRAMEF4O60810 478 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 MYL3P08590 195 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 SETSIPP0DME0 302 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 JUNBP17275 347 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 SLC6A9P48067 706 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 NKX6-1P78426 367 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 BTKQ06187 659 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 FGL2Q14314 439 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 UBE3CQ15386 1083 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 PRR31Q5SQ13 230 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 ABHD15Q6UXT9 468 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 Q6ZVL8 140 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 DPP9Q86TI2 863 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 STK32CQ86UX6 486 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 ACRBPQ8NEB7 543 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 PIK3C3Q8NEB9 887 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM168AQ92567 244 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 CLPTM1LQ96KA5 538 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 MRGPRX4Q96LA9 322 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 UIMC1Q96RL1 719 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 MCOLN1Q9GZU1 580 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 DCP1AQ9NPI6 582 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
HMGB1P46-201ENST00000520062 RASA4BC9J798 803 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 PHGDHO43175 533 aaKnown RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 RASA4O43374 803 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 FOSP01100 380 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 GASTP01350 101 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 HMGCRP04035 888 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 MYF5P13349 255 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 HNRNPLP14866 589 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM83BQ5T0W9 1011 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 TRMT10BQ6PF06 316 aaKnown RBP6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 APOA5Q6Q788 366 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 CLEC14AQ86T13 490 aa6.59□□□□□ -1.35
HMGB1P46-201ENST00000520062 REXO1L1PQ8IX06 675 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms