RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ZBTB39O15060 712 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 TSPAN1O60635 241 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 DDHD2O94830 711 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
PVT1-208ENST00000519481 URODP06132 367 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
PVT1-208ENST00000519481 EPCAMP16422 314 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 OR1G1P47890 313 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 MRE11P49959 708 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
PVT1-208ENST00000519481 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
PVT1-208ENST00000519481 KREMEN2Q8NCW0 462 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 SLC22A17Q8WUG5 538 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 BCL7CQ8WUZ0 217 aaPredicted RBP12.08□□□□□ -0.48
PVT1-208ENST00000519481 ACSF2Q96CM8 615 aaPredicted RBP12.08□□□□□ -0.48
PVT1-208ENST00000519481 HSD17B14Q9BPX1 270 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 SFXN1Q9H9B4 322 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 SORCS3Q9UPU3 1222 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 PRG3Q9Y2Y8 225 aaPredicted RBP12.08□□□□□ -0.48
PVT1-208ENST00000519481 IPPQ9Y573 584 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 TRIOO75962 3097 aa12.08□□□□□ -0.48
PVT1-208ENST00000519481 C2CD4DB7Z1M9 353 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 LARGE1O95461 756 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 SOD2P04179 222 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 ADH1AP07327 375 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 ARL2P36404 184 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 RARRES1P49788 294 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 TMC5Q6UXY8 1006 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
PVT1-208ENST00000519481 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 CPB2Q96IY4 423 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 KLHL5Q96PQ7 755 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 GAD1Q99259 594 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 NFKBIZQ9BYH8 718 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 CDH22Q9UJ99 828 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 USTQ9Y2C2 406 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 GIT1Q9Y2X7 761 aa12.07□□□□□ -0.48
PVT1-208ENST00000519481 ARL5CA6NH57 179 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 LRRIQ4A6NIV6 560 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 C2CD2LO14523 706 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 JAK2O60674 1132 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 CNPP09543 421 aaKnown RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 WEE2P0C1S8 567 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 GLRA2P23416 452 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 MCM7P33993 719 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 MLH1P40692 756 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 GLUD2P49448 558 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 MBTD1Q05BQ5 628 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 GNL2Q13823 731 aaKnown RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 CAPSQ13938 189 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 TMEM132AQ24JP5 1023 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 SLC27A1Q6PCB7 646 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 CCDC149Q6ZUS6 474 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 OTOP3Q7RTS5 596 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 GPR149Q86SP6 731 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 ZBTB8OSQ8IWT0 167 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 MCPH1Q8NEM0 835 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 ASAP3Q8TDY4 903 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 HERC2P3Q9BVR0 1158 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 VN1R3Q9BXE9 311 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 EIF2AQ9BY44 585 aaKnown RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 POLR3FQ9H1D9 316 aaPredicted RBP12.06□□□□□ -0.48
PVT1-208ENST00000519481 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
PVT1-208ENST00000519481 POTEMA6NI47 508 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 INPPL1O15357 1258 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 B4GALT3O60512 393 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 ARF4P18085 180 aaPredicted RBP12.05□□□□□ -0.48
PVT1-208ENST00000519481 AVPR2P30518 371 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 SCNN1GP51170 649 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 CLCN4P51793 760 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 ORC2Q13416 577 aaPredicted RBP12.05□□□□□ -0.48
PVT1-208ENST00000519481 IER5LQ5T953 404 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 C15orf39Q6ZRI6 1047 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 MAEAQ7L5Y9 396 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 COLGALT2Q8IYK4 626 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 NACC1Q96RE7 527 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 C2orf40Q9H1Z8 148 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 PRMT7Q9NVM4 692 aaPredicted RBP12.05□□□□□ -0.48
PVT1-208ENST00000519481 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 LIMCH1Q9UPQ0 1083 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 HES2Q9Y543 173 aa12.05□□□□□ -0.48
PVT1-208ENST00000519481 ARHGEF35A5YM69 484 aa12.04□□□□□ -0.48
PVT1-208ENST00000519481 LILRB3O75022 631 aa12.04□□□□□ -0.48
PVT1-208ENST00000519481 NPTXRO95502 500 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms