RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 FMNL3Q8IVF7 1028 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 CCDC155Q8N6L0 562 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 ERO1AQ96HE7 468 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 NLRP4Q96MN2 994 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 TARS2Q9BW92 718 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 FZD8Q9H461 694 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 AGPAT5Q9NUQ2 364 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 AKT3Q9Y243 479 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 A0A0B4J269 797 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 TOM1L1O75674 476 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 TUBB4AP04350 444 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 ADRB2P07550 413 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 SMIM10L2AP0DMW4 78 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 SMIM10L2BP0DMW5 78 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 RARBP10826 455 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 GNAT1P11488 350 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 PON1P27169 355 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 PRMT2P55345 433 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 CYP24A1Q07973 514 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 E4F1Q66K89 784 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 PDXDC1Q6P996 788 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 CBWD2Q8IUF1 395 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 TRPV1Q8NER1 839 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 KAT2BQ92831 832 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 SAAL1Q96ER3 474 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 PRIMPOLQ96LW4 560 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 MSTO1Q9BUK6 570 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 GANQ9H2C0 597 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
TRAPPC9-205ENST00000518839 SMIM35A0A1B0GVV1 85 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 INO80B-WBP1J3KQ70 363 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 KIF2AO00139 706 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 GPR25O00155 361 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 CLDN3O15551 220 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 NOL4O94818 638 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 TRIM49P0CI25 452 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 TRIM49CP0CI26 452 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 CYLC1P35663 651 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 POLR2FP61218 127 aaKnown RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 NFRKBQ6P4R8 1299 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 RRAGAQ7L523 313 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 SRGAP1Q7Z6B7 1085 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 C17orf53Q8N3J3 647 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 PARD3BQ8TEW8 1205 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 LMBR1Q8WVP7 490 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 BAP1Q92560 729 aa16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 ACO2Q99798 780 aaKnown RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 INO80BQ9C086 356 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-205ENST00000518839 MBLAC1A4D2B0 266 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SOWAHDA6NJG2 315 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 EPHB6O15197 1021 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 HMGCRP04035 888 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 CCDC175P0C221 793 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 C6orf222P0C671 652 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 UCHL3P15374 230 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SLC9A1P19634 815 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 MXI1P50539 228 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 MBTD1Q05BQ5 628 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PRPF4BQ13523 1007 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PSMD6Q15008 389 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SURF1Q15526 300 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SFMBT2Q5VUG0 894 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 MPZL3Q6UWV2 235 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 TSHZ1Q6ZSZ6 1077 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 CD99L2Q8TCZ2 262 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 PXYLP1Q8TE99 480 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 LENG1Q96BZ8 264 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 ANKFY1Q9P2R3 1169 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 TNFSF13BQ9Y275 285 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 USP20Q9Y2K6 914 aa16.36■□□□□ 0.21
TRAPPC9-205ENST00000518839 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 LRRC53A6NM62 1247 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 OGTO15294 1046 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 FKTNO75072 461 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 GPC3P51654 580 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 BEX3Q00994 111 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 MCL1Q07820 350 aa16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-205ENST00000518839 KYAT1Q16773 422 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms