RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CYP26A1O43174 497 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 CREB3O43889 395 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 OFD1O75665 1012 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 LDHAP00338 332 aaKnown RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 F13BP05160 661 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 LPOP22079 712 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 SDHAP31040 664 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC5A3P53794 718 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM109BQ6ICB4 259 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 NLRP10Q86W26 655 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 PTRH1Q86Y79 214 aaKnown RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 NOSTRINQ8IVI9 506 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 DLG3Q92796 817 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 SHISA4Q96DD7 197 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 RAX2Q96IS3 184 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAP6Q96JE9 813 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 GDF15Q99988 308 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM204AQ9H8W3 233 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 VTA1Q9NP79 307 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 TOPORSQ9NS56 1045 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 LMCD1Q9NZU5 365 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 H2AFY2Q9P0M6 372 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 PGAP2Q9UHJ9 254 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZNF281Q9Y2X9 895 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 MRC1P22897 1456 aa5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZNF831Q5JPB2 1677 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 A0A1W2PQJ5 194 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 C1QTNF9BB2RNN3 333 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 IFRD1O00458 451 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 DTNBO60941 627 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 AMY2AP04746 511 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SRGNP10124 158 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SYN1P17600 705 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 AMY2BP19961 511 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 CHRNA4P43681 627 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 GATA4P43694 442 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 GPR3P46089 330 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC6A11P48066 632 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 TM4SF4P48230 202 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ADKP55263 362 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 CHRNEQ04844 493 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ARHGEF6Q15052 776 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ACAP2Q15057 778 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SAFBQ15424 915 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 FSCN1Q16658 493 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 EMC4Q5J8M3 183 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 RRP12Q5JTH9 1297 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 IFIT1BQ5T764 474 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ANGEL2Q5VTE6 544 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 TIGD7Q6NT04 549 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 GALNT18Q6P9A2 607 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ESPNLQ6ZVH7 1005 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 KCTD1Q719H9 257 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 EPM2AIP1Q7L775 607 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 CD163Q86VB7 1156 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 DCP2Q8IU60 420 aaKnown RBP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SPPL2CQ8IUH8 684 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 STK11IPQ8N1F8 1099 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 ANKS4BQ8N8V4 417 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 CNBD1Q8NA66 436 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 RSAD2Q8WXG1 361 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 PPM1EQ8WY54 764 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 SMOC1Q9H4F8 434 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 LRRC4CQ9HCJ2 640 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 VAV3Q9UKW4 847 aa5.8□□□□□ -1.48
HMGB1P23-201ENST00000518743 FRMPD2Q68DX3 1309 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 CFAP54Q96N23 3096 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 SETXQ7Z333 2677 aaKnown RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 FADS2P1A8MWK0 482 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAN2B1O00754 1011 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 SCDO00767 359 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 HGSO14964 777 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 PRPF3O43395 683 aaKnown RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 IGLV1-40P01703 118 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 ESR1P03372 595 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 FUCA1P04066 466 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 ENPP1P22413 925 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAGEA10P43363 369 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 EPHA5P54756 1037 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 NHLH1Q02575 133 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 PRKCQQ04759 706 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 PRR5LQ6MZQ0 368 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 CATIPQ7Z7H3 387 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 PHYKPLQ8IUZ5 450 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 TEX2Q8IWB9 1127 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 C7orf31Q8N865 590 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 FAM181AQ8N9Y4 354 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 PIP4K2CQ8TBX8 421 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 ASIC4Q96FT7 647 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 UIMC1Q96RL1 719 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 RNF38Q9H0F5 515 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 AP5M1Q9H0R1 490 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 CCM2LQ9NUG4 571 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 DNAJC28Q9NX36 388 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 GULP1Q9UBP9 304 aa5.79□□□□□ -1.48
HMGB1P23-201ENST00000518743 NARFQ9UHQ1 456 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms