RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ANGPT1Q15389 498 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 GLB1LQ6UWU2 654 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 MRPL10Q7Z7H8 261 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 ERMNQ8TAM6 284 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 PIGOQ8TEQ8 1089 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 LPPQ93052 612 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 NACC1Q96RE7 527 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 CDCA3Q99618 268 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 MINDY3Q9H8M7 445 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 NGRNQ9NPE2 291 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 PCDHB2Q9Y5E7 798 aa11.75□□□□□ -0.53
PDGFRB-203ENST00000517660 CHD8Q9HCK8 2581 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 KIAA1671Q9BY89 1806 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 A0A087WWV3 80 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 PER2O15055 1255 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 OFD1O75665 1012 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 ERLIN2O94905 339 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 AXLP30530 894 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 BCAR1P56945 870 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 DUSP6Q16828 381 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 LONRF3Q496Y0 759 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 NOMO2Q5JPE7 1267 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 UBXN11Q5T124 520 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 CCDC105Q8IYK2 499 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 UBALD2Q8IYN6 164 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 DCLK2Q8N568 766 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 CNNM3Q8NE01 707 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 DBR1Q9UK59 544 aaKnown RBP11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 SORCS3Q9UPU3 1222 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 MAP1BP46821 2468 aaKnown RBP11.74□□□□□ -0.53
PDGFRB-203ENST00000517660 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 C2CD4DB7Z1M9 353 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 MED24O75448 989 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 ASGR2P07307 311 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 MUTP22033 750 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 GLRA2P23416 452 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 RPA1P27694 616 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 PBX3P40426 434 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 RNASELQ05823 741 aaKnown RBP11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 CAPSQ13938 189 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 RSPO4Q2I0M5 234 aaPredicted RBP11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 TMC7Q7Z402 723 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 ZBTB33Q86T24 672 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 CCDC51Q96ER9 411 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 APOL5Q9BWW9 433 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 TBC1D13Q9NVG8 400 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 INPP5FQ9Y2H2 1132 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 R4GN57 208 aa11.73□□□□□ -0.53
PDGFRB-203ENST00000517660 SPEGQ15772 3267 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 CNTNAP2Q9UHC6 1331 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 MEIS3P2A8K0S8 358 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 TSPAN1O60635 241 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 USO1O60763 962 aaKnown RBP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 GALTP07902 379 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 ITGA4P13612 1032 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 MCM2P49736 904 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 PDIA5Q14554 519 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 NOTUMQ6P988 496 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 MRPL43Q8N983 215 aaKnown RBP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 MCPH1Q8NEM0 835 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 URGCPQ8TCY9 931 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 RSAD1Q9HA92 442 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 LOXHD1Q8IVV2 1947 aa11.72□□□□□ -0.53
PDGFRB-203ENST00000517660 ARHGEF35A5YM69 484 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 HIDE1A8MVS5 230 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 ZC3H11AO75152 810 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 CXCL14O95715 111 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms