RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 PTPRZ1P23471 2315 aaPredicted RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 LILRB3O75022 631 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RFPL2O75678 378 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NCLP19338 710 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 GLUD2P49448 558 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 SCNN1GP51170 649 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 EVCP57679 992 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CYP4A11Q02928 519 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NPY5RQ15761 445 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 OTUD6AQ7L8S5 288 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NEK8Q86SG6 692 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 GLYCTKQ8IVS8 523 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DTWD2Q8NBA8 298 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 KCNG4Q8TDN1 519 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 TCP11Q8WWU5 503 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 SMG7Q92540 1137 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 STAMQ92783 540 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CPB2Q96IY4 423 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 FAM20AQ96MK3 541 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 PIDD1Q9HB75 910 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RGL1Q9NZL6 768 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 IGSF9Q9P2J2 1179 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CA14Q9ULX7 337 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 HES2Q9Y543 173 aa16.99■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CLUHO75153 1309 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ARL5CA6NH57 179 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 F8W810 466 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 INO80B-WBP1J3KQ70 363 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 N4BP1O75113 896 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NR1I2O75469 434 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CTTNQ14247 550 aaKnown RBP16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 PALB2Q86YC2 1186 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 COLGALT2Q8IYK4 626 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DYDC2Q96IM9 177 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ZFP42Q96MM3 310 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 MTRQ99707 1265 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 TRIM6Q9C030 488 aaPredicted RBP16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 KCNMB3Q9NPA1 279 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 UBN1Q9NPG3 1134 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DPP7Q9UHL4 492 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 VPS13AQ96RL7 3174 aa16.98■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ZBTB39O15060 712 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 TSPAN1O60635 241 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DTNBO60941 627 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 EPHA7Q15375 998 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 NOTUMQ6P988 496 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 GET4Q7L5D6 327 aaPredicted RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 TPH2Q8IWU9 490 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ST13P5Q8NFI4 369 aaPredicted RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 CCDC43Q96MW1 224 aaKnown RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ZSWIM6Q9HCJ5 1215 aa16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 WDR6Q9NNW5 1121 aaKnown RBP16.97■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ASAP2O43150 1006 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 GAS2O43903 313 aaKnown RBP16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 FOXK2Q01167 660 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 TFDP1Q14186 410 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 C4orf19Q8IY42 314 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 HACE1Q8IYU2 909 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RIN2Q8WYP3 895 aaPredicted RBP16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 RABGGTAQ92696 567 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ZNF274Q96GC6 653 aaPredicted RBP16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 MYADMQ96S97 322 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 DENND4AQ7Z401 1863 aa16.96■□□□□ 0.31
CSGALNACT1-204ENST00000517494 KRBA1A5PL33 1030 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 XBP1P17861 261 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 KIAA0319Q5VV43 1072 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PPP4R3AQ6IN85 833 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 OXER1Q8TDS5 423 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 HAS1Q92839 578 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CSRNP2Q9H175 543 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 NXF3Q9H4D5 531 aaKnown RBP16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 TBC1D17Q9HA65 648 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 GJB4Q9NTQ9 266 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 MIOSQ9NXC5 875 aa16.95■□□□□ 0.3
CSGALNACT1-204ENST00000517494 CDKL5O76039 1030 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 RPL17P18621 184 aaKnown RBP16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 AKAP5P24588 427 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 AXLP30530 894 aa16.94■□□□□ 0.3
CSGALNACT1-204ENST00000517494 ID4P47928 161 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms