RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 SERINC5Q86VE9 423 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 FAM186BQ8IYM0 893 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 ARRDC4Q8NCT1 418 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
TRPS1-206ENST00000517323 PDLIM2Q96JY6 352 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 ACO2Q99798 780 aaKnown RBP16.95■□□□□ 0.3
TRPS1-206ENST00000517323 CRACR2AQ9BSW2 395 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 TCHPQ9BT92 498 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 RTN4Q9NQC3 1192 aaKnown RBP16.95■□□□□ 0.3
TRPS1-206ENST00000517323 TOPORSQ9NS56 1045 aaPredicted RBP16.95■□□□□ 0.3
TRPS1-206ENST00000517323 RNF19AQ9NV58 838 aa16.95■□□□□ 0.3
TRPS1-206ENST00000517323 LRRN2O75325 713 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 CHRNA1P02708 482 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 TFRCP02786 760 aaKnown RBP16.94■□□□□ 0.3
TRPS1-206ENST00000517323 ARF4P18085 180 aaPredicted RBP16.94■□□□□ 0.3
TRPS1-206ENST00000517323 UBXN1Q04323 297 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 SCARA3Q6AZY7 606 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 CCDC127Q96BQ5 260 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 EXOC7Q9UPT5 735 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 MOXD2PA6NHM9 499 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 ABLIM1O14639 778 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 ASAP2O43150 1006 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 TSPAN1O60635 241 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 GNAT1P11488 350 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 EFNA5P52803 228 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
TRPS1-206ENST00000517323 TRIM59Q8IWR1 403 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 XXYLT1Q8NBI6 393 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 BORCS6Q96GS4 357 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 ZNF830Q96NB3 372 aaPredicted RBP16.94■□□□□ 0.3
TRPS1-206ENST00000517323 OGDHLQ9ULD0 1010 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 CDY2AQ9Y6F7 541 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 TRIP11Q15643 1979 aa16.94■□□□□ 0.3
TRPS1-206ENST00000517323 LRRC10BA6NIK2 292 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 ACKR2O00590 384 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 RPL13P26373 211 aaKnown RBP16.93■□□□□ 0.3
TRPS1-206ENST00000517323 SNX17Q15036 470 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
TRPS1-206ENST00000517323 THNSL1Q8IYQ7 743 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 HVCN1Q96D96 273 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 MSTO1Q9BUK6 570 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 MRPL4Q9BYD3 311 aaKnown RBP16.93■□□□□ 0.3
TRPS1-206ENST00000517323 CXCL16Q9H2A7 254 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
TRPS1-206ENST00000517323 PHF24Q9UPV7 400 aa16.93■□□□□ 0.3
TRPS1-206ENST00000517323 DNM1LO00429 736 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 EPB41P11171 864 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 VWA3BQ502W6 1294 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 MRFAP1L1Q96HT8 127 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 C2orf40Q9H1Z8 148 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 NDST4Q9H3R1 872 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 HES2Q9Y543 173 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 LAMA3Q16787 3333 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 H0YCG3 227 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 RNF225M0QZC1 329 aaPredicted RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 CLDN3O15551 220 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 PQBP1O60828 265 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 DARSP14868 501 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 PSMC2P35998 433 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 SPAG1Q07617 926 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 ZNF568Q3ZCX4 644 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 FAM114A1Q8IWE2 563 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 SLC35C1Q96A29 364 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 PDZD7Q9H5P4 517 aa16.92■□□□□ 0.3
TRPS1-206ENST00000517323 NOC2LQ9Y3T9 749 aaKnown RBP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRPS1-206ENST00000517323 A0A0B4J269 797 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 FAM189A1O60320 539 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 ERLIN2O94905 339 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 SGPL1O95470 568 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 EIF4BP23588 611 aaKnown RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 HOXA11P31270 313 aaPredicted RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 MRPS6P82932 125 aaKnown RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 C1orf220Q5T0J3 134 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 ZNF618Q5T7W0 954 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 CATSPER4Q7RTX7 472 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 EIF2AQ9BY44 585 aaKnown RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 PTPRJQ12913 1337 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 EPHB6O15197 1021 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 DLATP10515 647 aaKnown RBP16.91■□□□□ 0.3
TRPS1-206ENST00000517323 MAN2A1Q16706 1144 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 CBWD6Q4V339 395 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 CBWD3Q5JTY5 395 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 CBWD5Q5RIA9 395 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 TAF2Q6P1X5 1199 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 SLC9A9Q8IVB4 645 aa16.91■□□□□ 0.3
TRPS1-206ENST00000517323 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms