RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 GCOM1H8Y6P7 765 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PCDH17O14917 1159 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HOXA3O43365 443 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TULP3O75386 442 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CLEC3AO75596 197 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KRT36O76013 467 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 IGLV2-11P01706 119 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CD3EP07766 207 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ALOX5P09917 674 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAHP16930 419 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GRIA3P42263 894 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ABL2P42684 1182 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ENTPD1P49961 510 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MAPK10P53779 464 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SOX8P57073 446 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ATP2C1P98194 919 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PMP22Q01453 160 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RPL6Q02878 288 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NFATC2Q13469 925 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 AUHQ13825 339 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SF1Q15637 639 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZRSR1Q15695 479 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GAGE13Q4V321 117 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CD276Q5ZPR3 534 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 STEAP3Q658P3 488 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KIAA0895LQ68EN5 471 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TMEM200BQ69YZ2 307 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DSTYKQ6XUX3 929 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 COLCA1Q6ZS62 124 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RTL10Q7L3V2 364 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ADGRA1Q86SQ6 560 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DTX2Q86UW9 622 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CPNE8Q86YQ8 564 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ZNF547Q8IVP9 402 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 C11orf53Q8IXP5 236 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LILRB2Q8N423 598 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 IQCF1Q8N6M8 205 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 C3orf58Q8NDZ4 430 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LMO3Q8TAP4 145 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 HELQQ8TDG4 1101 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DPF3Q92784 378 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SLC7A6OSQ96CW6 309 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PCMTD1Q96MG8 357 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DUX3Q96PT4 197 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TEX101Q9BY14 249 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PELI2Q9HAT8 420 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SPON1Q9HCB6 807 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SDF2L1Q9HCN8 221 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TCF7L2Q9NQB0 619 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TSHZ2Q9NRE2 1034 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ABCB10Q9NRK6 738 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DIAPH3Q9NSV4 1193 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KCTD5Q9NXV2 234 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KLHL3Q9UH77 587 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FBXL21Q9UKT6 434 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MAGED2Q9UNF1 606 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 WDR3Q9UNX4 943 aaKnown RBP eCLIP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 GAB2Q9UQC2 676 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 DMTF1Q9Y222 760 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PCDHB6Q9Y5E3 794 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PCDHGB1Q9Y5G3 927 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 X6R8D5 127 aa-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 COL5A2P05997 1499 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1238P-201ENST00000517215 A0A0G2JNJ9 132 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 NPHP3-ACAD11A0A0J9YXS1 232 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SMTNL1A8MU46 457 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TARM1B6A8C7 271 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SUPT5HO00267 1087 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LEFTY2O00292 366 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 AURKAO14965 403 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SHOXO15266 292 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MYO1BO43795 1136 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 MAFKO60675 156 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PRMT3O60678 531 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PAPSS2O95340 614 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CFIP05156 583 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CFC1BP0CG36 223 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CFC1P0CG37 223 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ARL14EPLP0DKL9 152 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PRB4P10163 310 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PKMP14618 531 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PAMP19021 973 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ANOS1P23352 680 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SP100P23497 879 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FPR2P25090 351 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 CDC25AP30304 524 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 ADCY8P40145 1251 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PGGT1BP53609 377 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 BPIFB4P59827 614 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RNASE9P60153 205 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 KRTAP10-4P60372 401 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 RPS26P62854 115 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 POU3F1Q03052 451 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 LTBQ06643 244 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SEPT6Q14141 434 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 SPIDRQ14159 915 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 IZUMO4Q1ZYL8 232 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 FAM153CQ494X1 144 aa-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 PDCD4Q53EL6 469 aaKnown RBP-0.3□□□□□ -2.46
RNU6-1238P-201ENST00000517215 TCTE1Q5JU00 501 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms