RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PPARGC1AQ9UBK2 798 aaKnown RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 AGO2Q9UKV8 859 aaKnown RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 PRKCBP05771 671 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 IFNAR1P17181 557 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 TPI1P60174 286 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ETF1P62495 437 aaKnown RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ROR1Q01973 937 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ITPRIPL1Q6GPH6 555 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 TRIM48Q8IWZ4 208 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ZSCAN32Q9NX65 697 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 CCDC78A2IDD5 438 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 EPB42P16452 691 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 PPM1NQ8N819 430 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 BRIP1Q9BX63 1249 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 SLC13A1Q9BZW2 595 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 LRG1P02750 347 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 GCKP35557 465 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 ALDH1A3P47895 512 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 APBA1Q02410 837 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 PAN2Q504Q3 1202 aaKnown RBP11.69□□□□□ -0.54
TRIM41-209ENST00000515834 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 RAD54LQ92698 747 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 CCDC90BQ9GZT6 254 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 CACNA2D2Q9NY47 1150 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 GGA3Q9NZ52 723 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
TRIM41-209ENST00000515834 SUPT3HB4E1H0 165 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 MORF4L2Q15014 288 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PID1Q7Z2X4 250 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TNIP3Q96KP6 325 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 UNC45AQ9H3U1 944 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PEX19P40855 299 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 RGS7P49802 495 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PDCLQ13371 301 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 COASYQ13057 564 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 HSP90AA5PQ58FG0 334 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 NEK9Q8TD19 979 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 OTUB1Q96FW1 271 aaPredicted RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 AGAP3Q96P47 875 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TRAF3IP3Q9Y228 551 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 FAM47DPA6NHR8 397 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ITGA4P13612 1032 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 GPC5P78333 572 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 SH2D3AQ9BRG2 576 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 RUBCNLQ9H714 662 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 RGS12O14924 1447 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PZPP20742 1482 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 POLRMTO00411 1230 aaKnown RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 DIAPH2O60879 1101 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 CASP1P29466 404 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ZBED6P86452 979 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 EFTUD2Q15029 972 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■□ 21.6
TRIM41-209ENST00000515834 DUOXA2Q1HG44 320 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ZC3H18Q86VM9 953 aaKnown RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 FBXO41Q8TF61 875 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 EIF2AK1Q9BQI3 630 aaKnown RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 CCDC151A5D8V7 595 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TRIM49BA6NDI0 452 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 MAP3K13O43283 966 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 PALMO75781 387 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TTC13Q8NBP0 860 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 LRRC37BQ96QE4 947 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TRIM4Q9C037 500 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 ING2Q9H160 280 aa11.68□□□□□ -0.54
TRIM41-209ENST00000515834 APOBEC2Q9Y235 224 aaKnown RBP11.68□□□□□ -0.54
TRIM41-209ENST00000515834 TLR2O60603 784 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 GGPS1O95749 300 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 HSD17B4P51659 736 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 BCAR1P56945 870 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 PCSK7Q16549 785 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 SNX9Q9Y5X1 595 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 LRRC53A6NM62 1247 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 CDH6P55285 790 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 TWF1Q12792 350 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 KIZQ2M2Z5 673 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 CPDO75976 1380 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 GH1P01241 217 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 YWHABP31946 246 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms