RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 MUTYHQ9UIF7 546 aa19.39■□□□□ 0.69
DDX41-217ENST00000515562 LRRIQ4A6NIV6 560 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 B4GALT3O60512 393 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 DDHD2O94830 711 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 POMCP01189 267 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 U2AF2P26368 475 aaKnown RBP eCLIP19.38■□□□□ 0.692e-13■■□□□ 14.3
DDX41-217ENST00000515562 FXR2P51116 673 aaKnown RBP eCLIP19.38■□□□□ 0.69
DDX41-217ENST00000515562 AFF1P51825 1210 aaKnown RBP19.38■□□□□ 0.69
DDX41-217ENST00000515562 CDCA2Q69YH5 1023 aaPredicted RBP19.38■□□□□ 0.69
DDX41-217ENST00000515562 SLC27A1Q6PCB7 646 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 ZBTB8OSQ8IWT0 167 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 PRIMPOLQ96LW4 560 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 GPRC5CQ9NQ84 441 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 PRMT7Q9NVM4 692 aaPredicted RBP19.38■□□□□ 0.69
DDX41-217ENST00000515562 DZANK1Q9NVP4 752 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 ZMYM2Q9UBW7 1377 aa19.38■□□□□ 0.69
DDX41-217ENST00000515562 A0A087WWV3 80 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 ARHGEF35A5YM69 484 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 ARL5CA6NH57 179 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 ALDH2P05091 517 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 MLH1P40692 756 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 ITIH3Q06033 890 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 CES5AQ6NT32 575 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 MAEAQ7L5Y9 396 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 RPGRIP1Q96KN7 1286 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 NECTIN4Q96NY8 510 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 C2orf40Q9H1Z8 148 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
DDX41-217ENST00000515562 FAN1Q9Y2M0 1017 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 GIT1Q9Y2X7 761 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 STK24Q9Y6E0 443 aa19.37■□□□□ 0.69
DDX41-217ENST00000515562 A0A1B0GUA9 196 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 B4GALT5O43286 388 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 PLA2G5P39877 138 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 PTPN14Q15678 1187 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 PADI6Q6TGC4 694 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 PPFIBP1Q86W92 1011 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 AUTS2Q8WXX7 1259 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 GAD1Q99259 594 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 VN1R3Q9BXE9 311 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 ADAM7Q9H2U9 754 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 NXF3Q9H4D5 531 aaKnown RBP19.36■□□□□ 0.69
DDX41-217ENST00000515562 LRWD1Q9UFC0 647 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 HES2Q9Y543 173 aa19.36■□□□□ 0.69
DDX41-217ENST00000515562 LAD1O00515 517 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 NRP1O14786 923 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 NR1I2O75469 434 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 CYP11B2P19099 503 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 CCT6AP40227 531 aaKnown RBP19.35■□□□□ 0.69
DDX41-217ENST00000515562 DSC1Q08554 894 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 NBR1Q14596 966 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 PPP2R5AQ15172 486 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 FAM187BQ17R55 369 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 COLGALT2Q8IYK4 626 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 APOL6Q9BWW8 343 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 APOL5Q9BWW9 433 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 EMILIN2Q9BXX0 1053 aa19.35■□□□□ 0.69
DDX41-217ENST00000515562 TDRD15B5MCY1 1934 aaKnown RBP19.35■□□□□ 0.69
DDX41-217ENST00000515562 NPTXRO95502 500 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 SOD2P04179 222 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 NAMPTP43490 491 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 OR1G1P47890 313 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 SCNN1GP51170 649 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 PDIA5Q14554 519 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 C4orf32Q8N8J7 132 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 IGSF22Q8N9C0 903 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 EDAQ92838 391 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 FAM122AQ96E09 287 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 RIPOR3Q96MK2 946 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 ZFP42Q96MM3 310 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 RNF39Q9H2S5 420 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 FZD8Q9H461 694 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 MRPL17Q9NRX2 175 aaKnown RBP19.34■□□□□ 0.69
DDX41-217ENST00000515562 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
DDX41-217ENST00000515562 SSX2IPQ9Y2D8 614 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 PRG3Q9Y2Y8 225 aaPredicted RBP19.34■□□□□ 0.69
DDX41-217ENST00000515562 NR2E1Q9Y466 385 aa19.34■□□□□ 0.69
DDX41-217ENST00000515562 URODP06132 367 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 MTHFRP42898 656 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 GRIK3Q13003 919 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 PTGDRQ13258 359 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 MAPK6Q16659 721 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 DEPTORQ8TB45 409 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 SNX29Q8TEQ0 813 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 SLC22A17Q8WUG5 538 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 HERC2P3Q9BVR0 1158 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 BHMT2Q9H2M3 363 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 MARCH5Q9NX47 278 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 PCDHB6Q9Y5E3 794 aa19.33■□□□□ 0.68
DDX41-217ENST00000515562 N4BP3O15049 544 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 SSBP05455 408 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDX41-217ENST00000515562 EPCAMP16422 314 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 AKAP5P24588 427 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 PRPHP41219 470 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 TOB1P50616 345 aaPredicted RBP19.32■□□□□ 0.68
DDX41-217ENST00000515562 PRPF4BQ13523 1007 aaKnown RBP19.32■□□□□ 0.68
DDX41-217ENST00000515562 TMEM132AQ24JP5 1023 aa19.32■□□□□ 0.68
DDX41-217ENST00000515562 CABP7Q86V35 215 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms