RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MARCKSP29966 332 aaPredicted RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 NPTX2P47972 431 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 KRT17Q04695 432 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 GRIN1Q05586 938 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 TCEAL5Q5H9L2 206 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 FAM173BQ6P4H8 233 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 SPIRE2Q8WWL2 714 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 KCNN1Q92952 543 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 PABPC5Q96DU9 382 aaKnown RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 ZNF396Q96N95 335 aaPredicted RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 ADPGKQ9BRR6 497 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 PDZD7Q9H5P4 517 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 UBE2ZQ9H832 354 aaPredicted RBP14.09□□□□□ -0.15
CLCN3-210ENST00000515420 STK17AQ9UEE5 414 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 STK39Q9UEW8 545 aa14.09□□□□□ -0.15
CLCN3-210ENST00000515420 H0YCG3 227 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 K7ERI5 159 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 FSCN2O14926 492 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 SSBP05455 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 ZSCAN22P10073 491 aaPredicted RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 PLS3P13797 630 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 DNAJB1P25685 340 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 TXLNAP40222 546 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 SMTNP53814 917 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 PEX3P56589 373 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 BCAR1P56945 870 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 DCAF4L1Q3SXM0 396 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 ATL3Q6DD88 541 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 KRI1Q8N9T8 703 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 LINC00301Q8NCQ3 95 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 RASSF8Q8NHQ8 419 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 LARP4BQ92615 738 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 RAD54LQ92698 747 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 PLIN2Q99541 437 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 TMEM175Q9BSA9 504 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 NXF3Q9H4D5 531 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 KMT5AQ9NQR1 393 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 LARSQ9P2J5 1176 aaKnown RBP14.08□□□□□ -0.16
CLCN3-210ENST00000515420 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 INPP5FQ9Y2H2 1132 aa14.08□□□□□ -0.16
CLCN3-210ENST00000515420 ARL5CA6NH57 179 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 CCDC169A6NNP5 214 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 PPP6R2O75170 966 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 NPTXRO95502 500 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 YEATS4O95619 227 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 F13A1P00488 732 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
CLCN3-210ENST00000515420 CTC1Q2NKJ3 1217 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 LONRF3Q496Y0 759 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 EPSTI1Q96J88 318 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 CDCA3Q99618 268 aaPredicted RBP14.07□□□□□ -0.16
CLCN3-210ENST00000515420 KIFC3Q9BVG8 833 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
CLCN3-210ENST00000515420 TNFSF13BQ9Y275 285 aa14.07□□□□□ -0.16
CLCN3-210ENST00000515420 VCANP13611 3396 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 TTLL13PA6NNM8 815 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 GALTP07902 379 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 ABCD1P33897 745 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 IRS1P35568 1242 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 DDIT3P35638 169 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 PBX3P40426 434 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 MLH1P40692 756 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 ZNF131P52739 623 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 DSC1Q08554 894 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 HYAL1Q12794 435 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
CLCN3-210ENST00000515420 STK38Q15208 465 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 LEXMQ3ZCV2 418 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 ATF7IP2Q5U623 682 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 LRRC15Q8TF66 581 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 IGSF21Q96ID5 467 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 FAM193BQ96PV7 902 aaPredicted RBP14.06□□□□□ -0.16
CLCN3-210ENST00000515420 GAD1Q99259 594 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 MRPL4Q9BYD3 311 aaKnown RBP14.06□□□□□ -0.16
CLCN3-210ENST00000515420 POLD4Q9HCU8 107 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 HES2Q9Y543 173 aa14.06□□□□□ -0.16
CLCN3-210ENST00000515420 SPTLC2O15270 562 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 EDN1P05305 212 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 TFF2Q03403 129 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 RAD51AP2Q09MP3 1159 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 GRIK3Q13003 919 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 MCM6Q14566 821 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 PUS10Q3MIT2 529 aaKnown RBP14.05□□□□□ -0.16
CLCN3-210ENST00000515420 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 TAS1R3Q7RTX0 852 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 DDX53Q86TM3 631 aaKnown RBP14.05□□□□□ -0.16
CLCN3-210ENST00000515420 CDR2LQ86X02 465 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms