RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
SMAD1-215ENST00000515385 COL1A1P02452 1464 aaPredicted RBP13.72□□□□□ -0.21
SMAD1-215ENST00000515385 CCDC22O60826 627 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 PON1P27169 355 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 POLD1P28340 1107 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 STAT1P42224 750 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 CDR2Q01850 454 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 CAV1Q03135 178 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 MPP2Q14168 576 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 MAP7Q14244 749 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 KHDC1Q4VXA5 237 aaKnown RBP13.71□□□□□ -0.21
SMAD1-215ENST00000515385 TOM1L2Q6ZVM7 507 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 MORC4Q8TE76 937 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 C17orf50Q8WW18 174 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 MTMR9Q96QG7 549 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 ZNF184Q99676 751 aaPredicted RBP13.71□□□□□ -0.21
SMAD1-215ENST00000515385 DHX36Q9H2U1 1008 aaKnown RBP13.71□□□□□ -0.21
SMAD1-215ENST00000515385 GALNT8Q9NY28 637 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 G3BP2Q9UN86 482 aaKnown RBP13.71□□□□□ -0.21
SMAD1-215ENST00000515385 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 SMAPO00193 183 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 CDH16O75309 829 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 TTC4O95801 387 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 CREB1P16220 341 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 RCN1Q15293 331 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 PHLDB3Q6NSJ2 640 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 C11orf63Q6NUN7 778 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 RBM46Q8TBY0 533 aaKnown RBP13.71□□□□□ -0.21
SMAD1-215ENST00000515385 STMN2Q93045 179 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 DNAJC19Q96DA6 116 aa13.71□□□□□ -0.21
SMAD1-215ENST00000515385 GTPBP10A4D1E9 387 aaKnown RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 A8MXQ7 604 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 PSMG1O95456 288 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 GH1P01241 217 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ACTN1P12814 892 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 PLCG2P16885 1265 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SLC9A1P19634 815 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ITIH2P19823 946 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 MUTP22033 750 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 FOXN2P32314 431 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 TXKP42681 527 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 TCEAL1Q15170 157 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CALCRLQ16602 461 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 LIN52Q52LA3 116 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 EPM2AIP1Q7L775 607 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ADAT2Q7Z6V5 191 aaKnown RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CCNJLQ8IV13 435 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SYCP3Q8IZU3 236 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 C12orf50Q8NA57 414 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SLCO2A1Q92959 643 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 MXD3Q9BW11 206 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 HGSO14964 777 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SLC26A4O43511 780 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 TMCC1O94876 653 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 LYNP07948 512 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 COPB2P35606 906 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 UBAP2Q5T6F2 1119 aaKnown RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 SYDE1Q6ZW31 735 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ADGRA1Q86SQ6 560 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 NME8Q8N427 588 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 GLIS3Q8NEA6 775 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CRAMP1Q96RY5 1269 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ASCC2Q9H1I8 757 aaPredicted RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 MLXIPLQ9NP71 852 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 OSGEPQ9NPF4 335 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ZFP69BQ9UJL9 534 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
SMAD1-215ENST00000515385 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
SMAD1-215ENST00000515385 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 USP17L21D6R901 530 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 C2CD2LO14523 706 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 CAPN9O14815 690 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 EDF1O60869 148 aaKnown RBP13.69□□□□□ -0.22
SMAD1-215ENST00000515385 FAM200BP0CF97 657 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 CDK7P50613 346 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 SESN3P58005 492 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 ZNF211Q13398 564 aaPredicted RBP13.69□□□□□ -0.22
SMAD1-215ENST00000515385 STAT4Q14765 748 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 EPHA7Q15375 998 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 ZNF449Q6P9G9 518 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms