RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LILRA6Q6PI73 481 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 FAM124AQ86V42 546 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 ANKRD53Q8N9V6 530 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 RPL10LQ96L21 214 aaKnown RBP6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 LRGUKQ96M69 825 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 GPHA2Q96T91 129 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
HMGCS1-207ENST00000514610 ADCY6O43306 1168 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 MTSS1O43312 755 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 VCAM1P19320 739 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 PDCP20941 246 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 AKAP5P24588 427 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC6A9P48067 706 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 IL10RAQ13651 578 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 ZNF267Q14586 743 aaPredicted RBP6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 BORAQ6PGQ7 559 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 B3GNT9Q6UX72 402 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 LGI4Q8N135 537 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 AIFM3Q96NN9 605 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 PTPN18Q99952 460 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 JADE2Q9NQC1 790 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 SIK3Q9Y2K2 1263 aa6.73□□□□□ -1.33
HMGCS1-207ENST00000514610 WNT10BO00744 389 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 JUNP05412 331 aaKnown RBP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 WNT3AP56704 352 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 IFIT1BQ5T764 474 aaKnown RBP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 ADGRE4PQ86SQ3 457 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 PRR18Q8N4B5 295 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 ZNF480Q8WV37 535 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 KAT5Q92993 513 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 NEIL1Q96FI4 390 aaPredicted RBP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 DPYSL5Q9BPU6 564 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 XYLT2Q9H1B5 865 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 AGO3Q9H9G7 860 aaKnown RBP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 USP40Q9NVE5 1235 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 TRPS1Q9UHF7 1281 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 SAP30BPQ9UHR5 308 aaKnown RBP6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 PCDHA13Q9Y5I0 950 aa6.72□□□□□ -1.33
HMGCS1-207ENST00000514610 SLC26A4O43511 780 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 AP1G1O43747 822 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 ATF3P18847 181 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 ECHS1P30084 290 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 CNR2P34972 360 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 EPHB4P54760 987 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 PPP2CBP62714 309 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 PPP2CAP67775 309 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 GTF2H3Q13889 308 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 ZNF568Q3ZCX4 644 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 GAGE13Q4V321 117 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 USP45Q70EL2 814 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 GPR135Q8IZ08 494 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 RABGGTAQ92696 567 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 HPS3Q969F9 1004 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 C8orf48Q96LL4 319 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 ENKD1Q9H0I2 346 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 GPRC5DQ9NZD1 345 aa6.71□□□□□ -1.34
HMGCS1-207ENST00000514610 OTOL1A6NHN0 477 aaPredicted RBP6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 FAM171A2A8MVW0 826 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 PHF2O75151 1096 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 ITGA10O75578 1167 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 OFD1O75665 1012 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 SREBF1P36956 1147 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 CASRP41180 1078 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 RAC3P60763 192 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 DSC2Q02487 901 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 DUSP8Q13202 625 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 RIN1Q13671 783 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 ATAT1Q5SQI0 421 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 KRT40Q6A162 431 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 ARHGEF18Q6ZSZ5 1173 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 PLEKHH3Q7Z736 793 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 TRMT2AQ8IZ69 625 aaKnown RBP6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 FBXO18Q8NFZ0 1043 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 OR7D4Q8NG98 312 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 HDAC10Q969S8 669 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 RUNDC1Q96C34 613 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 TAAR9Q96RI9 348 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 C7orf25Q9BPX7 421 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 BCO1Q9HAY6 547 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 NMRK2Q9NPI5 230 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 PUF60Q9UHX1 559 aaKnown RBP6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 OAZ3Q9UMX2 235 aa6.7□□□□□ -1.34
HMGCS1-207ENST00000514610 SASH1O94885 1247 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 HSPA6P17066 643 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 DUSP2Q05923 314 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 HSP90AB2PQ58FF8 381 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 SIAH1Q8IUQ4 282 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 RHOT1Q8IXI2 618 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 CMTM4Q8IZR5 234 aa6.69□□□□□ -1.34
HMGCS1-207ENST00000514610 SHCBP1Q8NEM2 672 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms