RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.17
TCOF1-213ENST00000514442 ANKRD27Q96NW4 1050 aa14.02□□□□□ -0.17
TCOF1-213ENST00000514442 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
TCOF1-213ENST00000514442 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.17
TCOF1-213ENST00000514442 KCNA3P22001 575 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 ADGRA1Q86SQ6 560 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 KIF2BQ8N4N8 673 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 INTUQ9ULD6 942 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 TRIP13Q15645 432 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 OR6B2Q6IFH4 312 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 ABI1Q8IZP0 508 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 AGGF1Q8N302 714 aaeCLIP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 MCPH1Q8NEM0 835 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 NAF1Q96HR8 494 aaKnown RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 HEXIM2Q96MH2 286 aaKnown RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 LRRC37BQ96QE4 947 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 SLITRK6Q9H5Y7 841 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 PAIP2BQ9ULR5 123 aaKnown RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 TRIM49P0CI25 452 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 TRIM49CP0CI26 452 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 HSPA6P17066 643 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 GRIN1Q05586 938 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 CEP55Q53EZ4 464 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 TRIM11Q96F44 468 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 COPS2P61201 443 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 SDCCAG8Q86SQ7 713 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-213ENST00000514442 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.01□□□□□ -0.174e-9■□□□□ 9.9
TCOF1-213ENST00000514442 CEP72Q9P209 647 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
TCOF1-213ENST00000514442 NVLO15381 856 aaKnown RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 CLDN3O15551 220 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 AHCYL1O43865 530 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 NMT1P30419 496 aaKnown RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 DEFB132Q7Z7B7 95 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 PASD1Q8IV76 773 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 PROM2Q8N271 834 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 GRAMD1AQ96CP6 724 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 RILPQ96NA2 401 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 DDX47Q9H0S4 455 aaKnown RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 MAD1L1Q9Y6D9 718 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 AGTP01019 485 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 CEP70Q8NHQ1 597 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 ISCUQ9H1K1 167 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 NYAP2Q9P242 653 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 ENTPD3O75355 529 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 FGGP02679 453 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 ARPP19P56211 112 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 ELF3P78545 371 aaPredicted RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 SLC15A2Q16348 729 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 SLFN12LQ6IEE8 588 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 RHPN2Q8IUC4 686 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 MTRQ99707 1265 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 JMJD4Q9H9V9 463 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 HPSEQ9Y251 543 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 COL5A2P05997 1499 aaPredicted RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 SHOX2O60902 331 aaPredicted RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 TFRCP02786 760 aaKnown RBP14□□□□□ -0.17
TCOF1-213ENST00000514442 ZNF18P17022 549 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 BBOF1Q8ND07 529 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 CALN1Q9BXU9 219 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 TRIM9Q9C026 710 aa14□□□□□ -0.17
TCOF1-213ENST00000514442 SERPINB6P35237 376 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 HSD17B3P37058 310 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 PSMC5P62195 406 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 LRRC14Q15048 493 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 TMED2Q15363 201 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 TTMPQ5BVD1 217 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 MMP19Q99542 508 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 TFR2Q9UP52 801 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 DIS3Q9Y2L1 958 aaKnown RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 TCP11X1B4DZS4 312 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 HSPA9P38646 679 aaKnown RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 DPYDQ12882 1025 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 GUF1Q8N442 669 aaKnown RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 FGFR2P21802 821 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 GMPSP49915 693 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 MAPK6Q16659 721 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 TNS2Q63HR2 1409 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 RINT1Q6NUQ1 792 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 MAP7D3Q8IWC1 876 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 ZMAT2Q96NC0 199 aaKnown RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 GGA3Q9NZ52 723 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 DMGDHQ9UI17 866 aaKnown RBP13.99□□□□□ -0.17
TCOF1-213ENST00000514442 ZFP69BQ9UJL9 534 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 SNX24Q9Y343 169 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 POC1B-GALNT4F8VUJ3 575 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 GYG2O15488 501 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 RAD51CO43502 376 aa13.99□□□□□ -0.17
TCOF1-213ENST00000514442 PRLRP16471 622 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms