RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 PNMA1Q8ND90 353 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PIP4K2CQ8TBX8 421 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 MCRS1Q96EZ8 462 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SCLT1Q96NL6 688 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PCYT2Q99447 389 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SENP7Q9BQF6 1050 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 ZFP37Q9Y6Q3 630 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 NOTCH4Q99466 2003 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 B4E1Z4 1266 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 F8W810 466 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 MAN2B1O00754 1011 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 DCLK1O15075 740 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CSRP1P21291 193 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 GBP1P32455 592 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CRYBB1P53674 252 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 NLRP11P59045 1033 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 HAND2P61296 217 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SRSF1Q07955 248 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD1-211ENST00000514344 VPS53Q5VIR6 699 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 TANGO2Q6ICL3 276 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 GLB1LQ6UWU2 654 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CYP26C1Q6V0L0 522 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 NPAS3Q8IXF0 933 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 GAB3Q8WWW8 586 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PIBF1Q8WXW3 757 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PLEKHA4Q9H4M7 779 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 ZDHHC7Q9NXF8 308 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SRPK3Q9UPE1 567 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 ZNF316A6NFI3 1004 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 NRG2O14511 850 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 FOXP2O15409 715 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 EXTL3O43909 919 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 DDHD2O94830 711 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 KCNA2P16389 499 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 SOX9P48436 509 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 STAT5BP51692 787 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 CLCN3P51790 818 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 FAM193AP78312 1265 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 IRX4P78413 519 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 NOMO2Q5JPE7 1267 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 ZNF598Q86UK7 904 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 FTSJ3Q8IY81 847 aaKnown RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 STAG2Q8N3U4 1231 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 NUP205Q92621 2012 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 LOXL4Q96JB6 756 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 UBL7Q96S82 380 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 SLC32A1Q9H598 525 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 TCP11L1Q9NUJ3 509 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
CHD1-211ENST00000514344 AKT3Q9Y243 479 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PCDHB13Q9Y5F0 798 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 PCDHGA5Q9Y5G8 931 aa3.72□□□□□ -1.81
CHD1-211ENST00000514344 FLNCQ14315 2725 aa3.71□□□□□ -1.81
CHD1-211ENST00000514344 COL6A6A6NMZ7 2263 aa3.71□□□□□ -1.81
CHD1-211ENST00000514344 MTCL1Q9Y4B5 1905 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 SLC38A8A6NNN8 435 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 NRP1O14786 923 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 GPR32O75388 356 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 KRT38O76015 456 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 POMCP01189 267 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 SOD2P04179 222 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 ALDH2P05091 517 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 EIF4BP23588 611 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 GDI1P31150 447 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 RDXP35241 583 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 GLUD2P49448 558 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 KCNC4Q03721 635 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 TWF2Q6IBS0 349 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 USP17L6PQ6QN14 398 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 GIMAP8Q8ND71 665 aaPredicted RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 TTC8Q8TAM2 541 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 SPATA18Q8TC71 538 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 TNPO1Q92973 898 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 FAM212AQ96EL1 285 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 FAM193BQ96PV7 902 aaPredicted RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 MAF1Q9H063 256 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 JPH1Q9HDC5 661 aaPredicted RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 INVSQ9Y283 1065 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 FAN1Q9Y2M0 1017 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 EML5Q05BV3 1969 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 BACH1O14867 736 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 KHNYNO15037 678 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 ZBTB5O15062 677 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 ORC4O43929 436 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 SMARCA5O60264 1052 aaPredicted RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 ZMYND10O75800 440 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 STAM2O75886 525 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 PARP1P09874 1014 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 ITGB5P18084 799 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 OR1G1P47890 313 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 MTMR1Q13613 665 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 GSE1Q14687 1217 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 ELF2Q15723 593 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 PLK5Q496M5 336 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 PABPC1LQ4VXU2 614 aaKnown RBP3.71□□□□□ -1.82
CHD1-211ENST00000514344 LIN9Q5TKA1 542 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 PKN3Q6P5Z2 889 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 NLRX1Q86UT6 975 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 LRRC71Q8N4P6 559 aa3.71□□□□□ -1.82
CHD1-211ENST00000514344 RABGGTAQ92696 567 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms