RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MYOGP15173 224 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 BMP8BP34820 402 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 PBX2P40425 430 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 EFNA5P52803 228 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 SMTNP53814 917 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 POU5F1BQ06416 359 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ZNF710Q8N1W2 664 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 CEP120Q8N960 986 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 KIAA0895Q8NCT3 520 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 BICD1Q96G01 975 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ZBTB45Q96K62 511 aaPredicted RBP10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 NXF3Q9H4D5 531 aaKnown RBP10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 RGS18Q9NS28 235 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ANKFY1Q9P2R3 1169 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 GDAQ9Y2T3 454 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 HES2Q9Y543 173 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 ZMYM2Q9UBW7 1377 aa10.77□□□□□ -0.69
TOPBP1-209ENST00000513818 TRIOBPQ9H2D6 2365 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 CHD9Q3L8U1 2897 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 LCHNA4D1U4 455 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 C9IYK1 514 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ANKRD63C9JTQ0 380 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ARHGEF15O94989 841 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 FGFR1P11362 822 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ATP2A2P16615 1042 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 MCM4P33991 863 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 SARSP49591 514 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 EHHADHQ08426 723 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 STRN3Q13033 797 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 STK4Q13043 487 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ZNF568Q3ZCX4 644 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 PAN2Q504Q3 1202 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 SEZ6Q53EL9 994 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ATF7IP2Q5U623 682 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ISM2Q6H9L7 571 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC39A4Q6P5W5 647 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 NOTUMQ6P988 496 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ZNF720Q7Z2F6 126 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 ECHDC2Q86YB7 292 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 NELFCDQ8IXH7 590 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 SMYD4Q8IYR2 804 aaPredicted RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 MRPL4Q9BYD3 311 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 HAPLN2Q9GZV7 340 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 CDT1Q9H211 546 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 MTIF3Q9H2K0 278 aaKnown RBP10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 RNF19AQ9NV58 838 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 SEL1LQ9UBV2 794 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
TOPBP1-209ENST00000513818 TTC3P53804 2025 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 KIAA1671Q9BY89 1806 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 BIN1O00499 593 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SOX1O00570 391 aaPredicted RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 HNRNPDLO14979 420 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 N4BP3O15049 544 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 EFCAB14O75071 495 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 MATR3P43243 847 aaKnown RBP eCLIP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 LIG4P49917 911 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 OSTNP61366 133 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 GTF2BQ00403 316 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 L1TD1Q5T7N2 865 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 KANK3Q6NY19 840 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC24A5Q71RS6 500 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SPRED2Q7Z698 418 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SMG8Q8ND04 991 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SCFD1Q8WVM8 642 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SMARCE1Q969G3 411 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 ACO2Q99798 780 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 STRA6Q9BX79 667 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 TRIM6Q9C030 488 aaPredicted RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 CXCL16Q9H2A7 254 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 KDM4CQ9H3R0 1056 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 CLSTN2Q9H4D0 955 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 C1orf112Q9NSG2 853 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 MAN1B1Q9UKM7 699 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 LRFN2Q9ULH4 789 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 MAPK8IP1Q9UQF2 711 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 IPPQ9Y573 584 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
TOPBP1-209ENST00000513818 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms