RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 PAPLNO95428 1278 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 ALDH2P05091 517 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 URODP06132 367 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 SPATA31D3P0C874 917 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 MLH1P40692 756 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 QARSP47897 775 aaKnown RBP10.78□□□□□ -0.68
TCOF1-212ENST00000513538 AK2P54819 239 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 EMC2Q15006 297 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 SPATA31D4Q6ZUB0 917 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 HAS1Q92839 578 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 RTP3Q9BQQ7 232 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 RXFP1Q9HBX9 757 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 IGSF9Q9P2J2 1179 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 FBXL21Q9UKT6 434 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 HES2Q9Y543 173 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 IPPQ9Y573 584 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 CACNA1IQ9P0X4 2223 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 CLUHO75153 1309 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 VWA8A3KMH1 1905 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 DMDP11532 3685 aa10.78□□□□□ -0.68
TCOF1-212ENST00000513538 NOTCH4Q99466 2003 aa10.77□□□□□ -0.68
TCOF1-212ENST00000513538 CACNA1AO00555 2505 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 OTOGLQ3ZCN5 2332 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 CCDC195A0A1B0GUA6 201 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 DEXIO95424 95 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 GLUD1P00367 558 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 ADH1AP07327 375 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 YWHABP31946 246 aaKnown RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 GLUD2P49448 558 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 SCNN1GP51170 649 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 FOXK2Q01167 660 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 DSG1Q02413 1049 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 SSRP1Q08945 709 aaKnown RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 NONOQ15233 471 aaKnown RBP eCLIP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 EARS2Q5JPH6 523 aaKnown RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 GSTCDQ8NEC7 633 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 PSPC1Q8WXF1 523 aaKnown RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 CPB2Q96IY4 423 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 FAM193BQ96PV7 902 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 LXNQ9BS40 222 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 C22orf23Q9BZE7 217 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 NXF3Q9H4D5 531 aaKnown RBP10.77□□□□□ -0.69
TCOF1-212ENST00000513538 RGL1Q9NZL6 768 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 KANSL3Q9P2N6 904 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 EPS15L1Q9UBC2 864 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 WNT16Q9UBV4 365 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 MIA3Q5JRA6 1907 aa10.77□□□□□ -0.69
TCOF1-212ENST00000513538 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 P4HBP07237 508 aaKnown RBP10.76□□□□□ -0.69
TCOF1-212ENST00000513538 ITGA4P13612 1032 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 RFC5P40937 340 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 OR1G1P47890 313 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 ID4P47928 161 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 PTENP60484 403 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 HTR4Q13639 388 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 AMHR2Q16671 573 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 RUFY3Q7L099 469 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 CENPQQ7L2Z9 268 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-212ENST00000513538 KRT25Q7Z3Z0 450 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 C4orf19Q8IY42 314 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 TRIM22Q8IYM9 498 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 ASAP3Q8TDY4 903 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 RIN2Q8WYP3 895 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-212ENST00000513538 SMG7Q92540 1137 aaKnown RBP10.76□□□□□ -0.69
TCOF1-212ENST00000513538 RABGGTAQ92696 567 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 GPR62Q9BZJ7 368 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 TBC1D17Q9HA65 648 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 CHST7Q9NS84 486 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 DLGAP2Q9P1A6 1054 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 STK39Q9UEW8 545 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 R4GN57 208 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 PATJQ8NI35 1801 aa10.76□□□□□ -0.69
TCOF1-212ENST00000513538 ANHXE9PGG2 379 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 B4GALT5O43286 388 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 TGM5O43548 720 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 SRFP11831 508 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 GLULP15104 373 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
TCOF1-212ENST00000513538 CYP4A11Q02928 519 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 MBTD1Q05BQ5 628 aa10.75□□□□□ -0.69
TCOF1-212ENST00000513538 STK3Q13188 491 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms