RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 NPAS3Q8IXF0 933 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 METTL13Q8N6R0 699 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 DNASE1L2Q92874 299 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.88□□□□□ -0.67
PTPN20-228ENST00000513266 RIOX1Q9H6W3 641 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 DACT1Q9NYF0 836 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 KIF26AQ9ULI4 1882 aaPredicted RBP10.88□□□□□ -0.67
PTPN20-228ENST00000513266 SSX2IPQ9Y2D8 614 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 FAN1Q9Y2M0 1017 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 PCDHGA5Q9Y5G8 931 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 VWA8A3KMH1 1905 aa10.88□□□□□ -0.67
PTPN20-228ENST00000513266 THADAQ6YHU6 1953 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
PTPN20-228ENST00000513266 NRP1O14786 923 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 ECI2O75521 394 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
PTPN20-228ENST00000513266 ATG7O95352 703 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 DARSP14868 501 aaKnown RBP10.87□□□□□ -0.67
PTPN20-228ENST00000513266 ATP4AP20648 1035 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 HOXA6P31267 233 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
PTPN20-228ENST00000513266 DSG1Q02413 1049 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 CCDC178Q5BJE1 867 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 DAB2IPQ5VWQ8 1189 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 GLYCTKQ8IVS8 523 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 PI4K2BQ8TCG2 481 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 GAB3Q8WWW8 586 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 FAM3CQ92520 227 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 VPS45Q9NRW7 570 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
PTPN20-228ENST00000513266 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 ALDH2P05091 517 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 PTGDRQ13258 359 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 WDR44Q5JSH3 913 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 TANGO2Q6ICL3 276 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 Q6ZS52 159 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 CACNA2D4Q7Z3S7 1137 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 CCDC60Q8IWA6 550 aaPredicted RBP10.86□□□□□ -0.67
PTPN20-228ENST00000513266 LINC01465Q8N7H1 131 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 DEFB124Q8NES8 71 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
PTPN20-228ENST00000513266 ING5Q8WYH8 240 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 LRIG1Q96JA1 1093 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 B3GALT6Q96L58 329 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 MBOAT7Q96N66 472 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 HNRNPABQ99729 332 aaKnown RBP10.86□□□□□ -0.67
PTPN20-228ENST00000513266 TMEM175Q9BSA9 504 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 RNF41Q9H4P4 317 aaPredicted RBP10.86□□□□□ -0.67
PTPN20-228ENST00000513266 KCNH7Q9NS40 1196 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 RBM12Q9NTZ6 932 aaKnown RBP10.86□□□□□ -0.67
PTPN20-228ENST00000513266 AKT3Q9Y243 479 aa10.86□□□□□ -0.67
PTPN20-228ENST00000513266 NFASCO94856 1347 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 PTPN13Q12923 2485 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 PIEZO2Q9H5I5 2752 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 PTPRBP23467 1997 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 LNP1A1A4G5 178 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 FAM221BA6H8Z2 402 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 B4E1Z4 1266 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 MAFGO15525 162 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 RPP40O75818 363 aaKnown RBP10.85□□□□□ -0.67
PTPN20-228ENST00000513266 SEC24BO95487 1268 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 CCNE2O96020 404 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 RPL17P18621 184 aaKnown RBP10.85□□□□□ -0.67
PTPN20-228ENST00000513266 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-228ENST00000513266 GRM2Q14416 872 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 CUL5Q93034 780 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 CHST7Q9NS84 486 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 HCFC1R1Q9NWW0 138 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 FBXW11Q9UKB1 542 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-228ENST00000513266 PIAS3Q9Y6X2 628 aa10.85□□□□□ -0.67
PTPN20-228ENST00000513266 A0A0D9SFI3 127 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 F8W810 466 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-228ENST00000513266 BACH1O14867 736 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 CCL16O15467 120 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ZNF623O75123 536 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPN20-228ENST00000513266 FCARP24071 287 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 GPC3P51654 580 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 FGD1P98174 961 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 SCAPQ12770 1279 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 TWF2Q6IBS0 349 aaKnown RBP10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ABHD15Q6UXT9 468 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 AGMOQ6ZNB7 445 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ZNF589Q86UQ0 364 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-228ENST00000513266 LRRC71Q8N4P6 559 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
PTPN20-228ENST00000513266 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 SDF4Q9BRK5 362 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 MKNK1Q9BUB5 465 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 CHST12Q9NRB3 414 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 ZSWIM5Q9P217 1185 aa10.84□□□□□ -0.67
PTPN20-228ENST00000513266 FNIP2Q9P278 1114 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms