RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 ANKRD20A1Q5TYW2 823 aa17.11■□□□□ 0.33
TRIO-221ENST00000513206 DDX50Q9BQ39 737 aaKnown RBP17.11■□□□□ 0.33
TRIO-221ENST00000513206 NUP85Q9BW27 656 aa17.11■□□□□ 0.33
TRIO-221ENST00000513206 SLC4A7Q9Y6M7 1214 aa17.11■□□□□ 0.33
TRIO-221ENST00000513206 TMCC1O94876 653 aa17.11■□□□□ 0.33
TRIO-221ENST00000513206 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
TRIO-221ENST00000513206 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
TRIO-221ENST00000513206 NAALADL2Q58DX5 795 aa17.11■□□□□ 0.33
TRIO-221ENST00000513206 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
TRIO-221ENST00000513206 F5H423 210 aaPredicted RBP17.11■□□□□ 0.33
TRIO-221ENST00000513206 DFFAO00273 331 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 TXNP10599 105 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 LCP1P13796 627 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 SIK2Q9H0K1 926 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 CTNND1O60716 968 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 GLE1Q53GS7 698 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 LCMT1Q9UIC8 334 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 STAP1Q9ULZ2 295 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 TAF1CQ15572 869 aaPredicted RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 QRICH1Q2TAL8 776 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 ANKRD7Q92527 254 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 PALMO75781 387 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 FGGP02679 453 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 KRT39Q6A163 491 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 TSR3Q9UJK0 312 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 TRAPPC3O43617 180 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 POLD4Q9HCU8 107 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 UPP2O95045 317 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 USP11P51784 963 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 CRYMQ14894 314 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 ANO4Q32M45 955 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
TRIO-221ENST00000513206 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
TRIO-221ENST00000513206 H3BRJ5 948 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ALDH1A1P00352 501 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ADORA2BP29275 332 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ARHGAP18Q8N392 663 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 DRC3Q9H069 523 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 LZICQ8WZA0 190 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ORC2Q13416 577 aaPredicted RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 APOEP02649 317 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 C6orf222P0C671 652 aaPredicted RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 NNTQ13423 1086 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 PCDHA10Q9Y5I2 948 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 FAM102AQ5T9C2 384 aaPredicted RBP17.09■□□□□ 0.33
TRIO-221ENST00000513206 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 CEP72Q9P209 647 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 ITM2BQ9Y287 266 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 RIMBP3CA6NJZ7 1639 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 RIMBP3BA6NNM3 1639 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 RIMBP3Q9UFD9 1639 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 RNF149Q8NC42 400 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 COG4Q9H9E3 785 aa17.09■□□□□ 0.33
TRIO-221ENST00000513206 A8MXQ7 604 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 KRT7P08729 469 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 CACNB2Q08289 660 aaPredicted RBP17.08■□□□□ 0.33
TRIO-221ENST00000513206 SERPINI1Q99574 410 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 LARGE1O95461 756 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 ATICP31939 592 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 CUL1Q13616 776 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 LPAR1Q92633 364 aa17.08■□□□□ 0.33
TRIO-221ENST00000513206 SRGAP2O75044 1071 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 EEF1B2P24534 225 aaKnown RBP17.08■□□□□ 0.32
TRIO-221ENST00000513206 PRRG1O14668 218 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 ATP6V1E1P36543 226 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 TTC23LQ6PF05 361 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 SPON2Q9BUD6 331 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.32
TRIO-221ENST00000513206 FOXO4P98177 505 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 CUL4AQ13619 759 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 HEATR6Q6AI08 1181 aaKnown RBP17.08■□□□□ 0.32
TRIO-221ENST00000513206 LDHDQ86WU2 507 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 IFNA8P32881 189 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 KCNA1Q09470 495 aa17.08■□□□□ 0.32
TRIO-221ENST00000513206 MTIF3Q9H2K0 278 aaKnown RBP17.08■□□□□ 0.32
TRIO-221ENST00000513206 DIS3Q9Y2L1 958 aaKnown RBP17.08■□□□□ 0.32
TRIO-221ENST00000513206 RARBP10826 455 aa17.07■□□□□ 0.32
TRIO-221ENST00000513206 IER5Q5VY09 327 aa17.07■□□□□ 0.32
TRIO-221ENST00000513206 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
TRIO-221ENST00000513206 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
TRIO-221ENST00000513206 PCDHB7Q9Y5E2 793 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms