RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RASIP1Q5U651 963 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 TMEM161BQ8NDZ6 487 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 SPIRE2Q8WWL2 714 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 TSPYL2Q9H2G4 693 aaPredicted RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 PRMT7Q9NVM4 692 aaPredicted RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 GRXCR1A8MXD5 290 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 AMHP03971 560 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 ATP2A2P16615 1042 aaKnown RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 ARF4P18085 180 aaPredicted RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 NCKAP1LP55160 1127 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 COASYQ13057 564 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 HAUS6Q7Z4H7 955 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 HPS3Q969F9 1004 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 NTPCRQ9BSD7 190 aaKnown RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 FZD8Q9H461 694 aa18.1■□□□□ 0.49
HMGCL-209ENST00000513148 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
HMGCL-209ENST00000513148 GBF1Q92538 1859 aa18.09■□□□□ 0.49
HMGCL-209ENST00000513148 GAP43P17677 238 aa18.09■□□□□ 0.49
HMGCL-209ENST00000513148 HOXA11P31270 313 aaPredicted RBP18.09■□□□□ 0.49
HMGCL-209ENST00000513148 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
HMGCL-209ENST00000513148 PRPF4BQ13523 1007 aaKnown RBP18.09■□□□□ 0.49
HMGCL-209ENST00000513148 DSC3Q14574 896 aa18.09■□□□□ 0.49
HMGCL-209ENST00000513148 TAS1R3Q7RTX0 852 aa18.09■□□□□ 0.49
HMGCL-209ENST00000513148 ZNF830Q96NB3 372 aaPredicted RBP18.09■□□□□ 0.49
HMGCL-209ENST00000513148 RGS18Q9NS28 235 aa18.09■□□□□ 0.49
HMGCL-209ENST00000513148 FRMD3A2A2Y4 597 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 MAPTP10636 758 aaKnown RBP18.08■□□□□ 0.49
HMGCL-209ENST00000513148 STRN3Q13033 797 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 PCBP1Q15365 356 aaKnown RBP eCLIP18.08■□□□□ 0.49
HMGCL-209ENST00000513148 ZC2HC1CQ53FD0 456 aaPredicted RBP18.08■□□□□ 0.49
HMGCL-209ENST00000513148 FIZ1Q96SL8 496 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 SLC9A7Q96T83 725 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 FGFBP2Q9BYJ0 223 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 KCNG1Q9UIX4 513 aa18.08■□□□□ 0.49
HMGCL-209ENST00000513148 TRIOBPQ9H2D6 2365 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 CNTNAP2Q9UHC6 1331 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 GTPBP6O43824 516 aaPredicted RBP18.08■□□□□ 0.48
HMGCL-209ENST00000513148 KINO60870 393 aaKnown RBP18.08■□□□□ 0.48
HMGCL-209ENST00000513148 CDK11BP21127 795 aaKnown RBP18.08■□□□□ 0.48
HMGCL-209ENST00000513148 TERF2Q15554 542 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 NOTUMQ6P988 496 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 UNC13DQ70J99 1090 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 RNF169Q8NCN4 708 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 TIGD1Q96MW7 591 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 FUCA2Q9BTY2 467 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 TMEM134Q9H6X4 195 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 CHST12Q9NRB3 414 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 SEL1LQ9UBV2 794 aa18.08■□□□□ 0.48
HMGCL-209ENST00000513148 ACKR2O00590 384 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 GCNT3O95395 438 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 RABGGTBP53611 331 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 PNOCQ13519 176 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 FAM187BQ17R55 369 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 CNNM4Q6P4Q7 775 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 SLC24A5Q71RS6 500 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 CCDC34Q96HJ3 373 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 TTC3P53804 2025 aa18.07■□□□□ 0.48
HMGCL-209ENST00000513148 A0A1W2PPC1 479 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 C9IYK1 514 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 H0YCG3 227 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 AXLP30530 894 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 CASP5P51878 434 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 POSTNQ15063 836 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 HERC6Q8IVU3 1022 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 BICD1Q96G01 975 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 ZBED2Q9BTP6 218 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 TARS2Q9BW92 718 aaKnown RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 EIF2AQ9BY44 585 aaKnown RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 OLFML3Q9NRN5 406 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 C1orf112Q9NSG2 853 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 LRFN2Q9ULH4 789 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 TULP2O00295 520 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 MYBP10242 640 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 SARSP49591 514 aaKnown RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 NT5DC1Q5TFE4 455 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 ZNF720Q7Z2F6 126 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 GLIS3Q8NEA6 775 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 TOP1MTQ969P6 601 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 MRPL4Q9BYD3 311 aaKnown RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 TRIM6Q9C030 488 aaPredicted RBP18.06■□□□□ 0.48
HMGCL-209ENST00000513148 PDZD7Q9H5P4 517 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 FAM105AQ9NUU6 356 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 TBX20Q9UMR3 447 aa18.06■□□□□ 0.48
HMGCL-209ENST00000513148 KLRC4O43908 158 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 DPYDQ12882 1025 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 ATF7IP2Q5U623 682 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 KRT222Q8N1A0 295 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 EXOC1Q9NV70 894 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 PCDHB7Q9Y5E2 793 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.05■□□□□ 0.48
HMGCL-209ENST00000513148 A0A1B0GUA9 196 aa18.05■□□□□ 0.48
HMGCL-209ENST00000513148 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.05■□□□□ 0.48
HMGCL-209ENST00000513148 PVALEFA0A1B0GWK0 134 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms