RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 KRT85P78386 507 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 DUSP2Q05923 314 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 PRKD1Q15139 912 aaPredicted RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 FKBP15Q5T1M5 1219 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 GJC2Q5T442 439 aaPredicted RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 MBNL2Q5VZF2 373 aaKnown RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 MFSD5Q6N075 450 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 PGM2L1Q6PCE3 622 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 LILRA3Q8N6C8 439 aaPredicted RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 OR5M3Q8NGP4 307 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 MTMR8Q96EF0 704 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 ZNF512Q96ME7 567 aaPredicted RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 ACE2Q9BYF1 805 aaPredicted RBP6.15□□□□□ -1.42
CHD1-210ENST00000513064 MKS1Q9NXB0 559 aa6.15□□□□□ -1.42
CHD1-210ENST00000513064 FZD9O00144 591 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 MUSKO15146 869 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 OSMP13725 252 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 PPP3CAQ08209 521 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 MRPL49Q13405 166 aaKnown RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 MST1LQ2TV78 715 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 SGMS1Q86VZ5 419 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 ANKRD35Q8N283 1001 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 ZNF808Q8N4W9 903 aaPredicted RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 RIN2Q8WYP3 895 aaPredicted RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 ASPSCR1Q9BZE9 553 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 HOMER2Q9NSB8 354 aa6.14□□□□□ -1.43
CHD1-210ENST00000513064 RBM12Q9NTZ6 932 aaKnown RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 HECAQ9UBI9 543 aaPredicted RBP6.14□□□□□ -1.43
CHD1-210ENST00000513064 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 SHTN1A0MZ66 631 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 STC2O76061 302 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 CRHR1P34998 444 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 MCAMP43121 646 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 GZMKP49863 264 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 ELAVL1Q15717 326 aaKnown RBP6.13□□□□□ -1.43
CHD1-210ENST00000513064 ABCB5Q2M3G0 1257 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 FAM180AQ6UWF9 173 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 ZNF480Q8WV37 535 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 ARL8AQ96BM9 186 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 IL17RAQ96F46 866 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 FUBP3Q96I24 572 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD1-210ENST00000513064 GPR20Q99678 358 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 GPRC5DQ9NZD1 345 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
CHD1-210ENST00000513064 AKR1B10O60218 316 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA12O60330 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 ITGA10O75578 1167 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 TNKSO95271 1327 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 MT-CO1P00395 513 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 MYBL2P10244 700 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 GSPT1P15170 499 aaKnown RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 ANAPC15P60006 121 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 CLUL1Q15846 466 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 Q6ZVL8 140 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 APBB1IPQ7Z5R6 666 aaPredicted RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 PALM2Q8IXS6 379 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 MDGA1Q8NFP4 955 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 JADE3Q92613 823 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 HOXB13Q92826 284 aaPredicted RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 SLC2A13Q96QE2 648 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 SLC13A1Q9BZW2 595 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 TRPS1Q9UHF7 1281 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 ZBTB21Q9ULJ3 1066 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA9Q9Y5G4 932 aaKnown RBP6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA8Q9Y5G5 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA7Q9Y5G6 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA6Q9Y5G7 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA3Q9Y5H0 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 PCDHGA2Q9Y5H1 932 aa6.12□□□□□ -1.43
CHD1-210ENST00000513064 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 KLHL33A6NCF5 533 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 CAPN14A8MX76 684 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 CYP27B1O15528 508 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 ADSLP30566 484 aaPredicted RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 IGBP1P78318 339 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 PCBP2Q15366 365 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD1-210ENST00000513064 FAM214AQ32MH5 1076 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 GSPT2Q8IYD1 628 aaKnown RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 ELOA2Q8IYF1 753 aaPredicted RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 THEMISQ8N1K5 641 aaPredicted RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 CDC5LQ99459 802 aaKnown RBP6.11□□□□□ -1.43
CHD1-210ENST00000513064 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 BCO1Q9HAY6 547 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 DMRT3Q9NQL9 472 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 GIT1Q9Y2X7 761 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 MRFAP1Q9Y605 127 aa6.11□□□□□ -1.43
CHD1-210ENST00000513064 PLSCR1O15162 318 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 MFAP3LO75121 409 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 GNAT2P19087 354 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 ACRV1P26436 265 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 ECHS1P30084 290 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 WASP42768 502 aa6.1□□□□□ -1.43
CHD1-210ENST00000513064 EXOSC10Q01780 885 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms