RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 IRF6O14896 467 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 VCAM1P19320 739 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 PRKCEQ02156 737 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 GABPAQ06546 454 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 STXBP2Q15833 593 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 APTXQ7Z2E3 356 aaKnown RBP12.82□□□□□ -0.36
PRDM16-207ENST00000512462 ARL8AQ96BM9 186 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
PRDM16-207ENST00000512462 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SGK1O00141 431 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SMARCA1P28370 1054 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 MAGOHP61326 146 aaKnown RBP12.81□□□□□ -0.36
PRDM16-207ENST00000512462 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ARSHQ5FYA8 562 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 CCDC89Q8N998 374 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 AGPAT1Q99943 283 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 NKIRAS1Q9NYS0 192 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
PRDM16-207ENST00000512462 MYH10P35580 1976 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SSU72P8A0A1W2PR75 194 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ATP8B1O43520 1251 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ATP9AO75110 1047 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 SGPL1O95470 568 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 GPC5P78333 572 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 HDLBPQ00341 1268 aaKnown RBP12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
PRDM16-207ENST00000512462 KRT39Q6A163 491 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 ATP6V0A4Q9HBG4 840 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
PRDM16-207ENST00000512462 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 STK38LQ9Y2H1 464 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 MYH15Q9Y2K3 1946 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
PRDM16-207ENST00000512462 GOLGA8KD6RF30 607 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 GGPS1O95749 300 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 FBXL13Q8NEE6 735 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 TLR10Q9BXR5 811 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF302Q9NR11 478 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 RAB20Q9NX57 234 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 SALL4Q9UJQ4 1053 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 EGFRP00533 1210 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 FAM153BP0C7A2 387 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ATF2P15336 505 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 KRT76Q01546 638 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 FAM153CQ494X1 144 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 SLC35C1Q96A29 364 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 TUFT1Q9NNX1 390 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 TAS2R14Q9NYV8 317 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
PRDM16-207ENST00000512462 GJB6O95452 261 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 KRT1P04264 644 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
PRDM16-207ENST00000512462 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 PBKQ96KB5 322 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ALG6Q9Y672 507 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 COL4A1P02462 1669 aa12.8□□□□□ -0.36
PRDM16-207ENST00000512462 GRAP2O75791 330 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 TNNC2P02585 160 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 PBX1P40424 430 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 NAB2Q15742 525 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ZNF720Q7Z2F6 126 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 SYTL5Q8TDW5 730 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ECEL1O95672 775 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 MMEP08473 750 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 COMTP21964 271 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 NT5C2P49902 561 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 DNAJC24Q6P3W2 148 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 FOXR1Q6PIV2 292 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 CCDC137Q6PK04 289 aaKnown RBP12.79□□□□□ -0.36
PRDM16-207ENST00000512462 SLC47A2Q86VL8 602 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 FMNL3Q8IVF7 1028 aa12.79□□□□□ -0.36
PRDM16-207ENST00000512462 ANKS4BQ8N8V4 417 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms