RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 IKBKEQ14164 716 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 PGM5Q15124 567 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 TMEM31Q5JXX7 168 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 CELF3Q5SZQ8 465 aaKnown RBP7.69□□□□□ -1.18
COPS4-209ENST00000511653 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 CYB5R4Q7L1T6 521 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 SERINC5Q86VE9 423 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 MYOCDQ8IZQ8 938 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.69□□□□□ -1.18
COPS4-209ENST00000511653 SREK1Q8WXA9 508 aaKnown RBP7.69□□□□□ -1.18
COPS4-209ENST00000511653 SLC7A3Q8WY07 619 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 MTMR8Q96EF0 704 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 C16orf70Q9BSU1 422 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 KATNAL1Q9BW62 490 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 CEP44Q9C0F1 390 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 LMCD1Q9NZU5 365 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 MAD2L2Q9UI95 211 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 TELO2Q9Y4R8 837 aa7.69□□□□□ -1.18
COPS4-209ENST00000511653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.68□□□□□ -1.18
COPS4-209ENST00000511653 PARNO95453 639 aaKnown RBP7.68□□□□□ -1.18
COPS4-209ENST00000511653 HOXC8P31273 242 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 THPOP40225 353 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 HTRA4P83105 476 aaPredicted RBP7.68□□□□□ -1.18
COPS4-209ENST00000511653 SEC23AQ15436 765 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 PLEKHG4Q58EX7 1191 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 STOX1Q6ZVD7 989 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 VSIG10LQ86VR7 867 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 HOMER1Q86YM7 354 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 SMC5Q8IY18 1101 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 FBXO27Q8NI29 283 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 SPON2Q9BUD6 331 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 AMNQ9BXJ7 453 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 MAF1Q9H063 256 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 DIAPH3Q9NSV4 1193 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 PCDHA1Q9Y5I3 950 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 TAF6LQ9Y6J9 622 aa7.68□□□□□ -1.18
COPS4-209ENST00000511653 RSPH10B2B2RC85 870 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 KLRF2D3W0D1 207 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 H3BQ06 376 aaPredicted RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 H3BRJ5 948 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 ZBTB5O15062 677 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 CYTH3O43739 400 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 EFCAB14O75071 495 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 PPFIA4O75335 1185 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 LGALS2P05162 132 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 RSPH10BP0C881 870 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 SMIM10L2AP0DMW4 78 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 SMIM10L2BP0DMW5 78 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 NID1P14543 1247 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 DNAJA1P31689 397 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 CAMK2GQ13555 558 aaPredicted RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 LEXMQ3ZCV2 418 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 CCDC178Q5BJE1 867 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 IFIT1BQ5T764 474 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 PDZD3Q86UT5 571 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 SULF2Q8IWU5 870 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 FAM178BQ8IXR5 827 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 PIGSQ96S52 555 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 UBAC1Q9BSL1 405 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 DSCC1Q9BVC3 393 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 UBP1Q9NZI7 540 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 INSL6Q9Y581 213 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 EMSYQ7Z589 1322 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 PLXNA4Q9HCM2 1894 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 C17orf102A2RUQ5 167 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 PI4K2BG5E9Z4 385 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 LILRB5O75023 590 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 WFS1O76024 890 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 IGHDP01880 384 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 AMHP03971 560 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 NT5C2P49902 561 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 MRPS9P82933 396 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 SEPT6Q14141 434 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 IMMTQ16891 758 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 EPC2Q52LR7 807 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 CHD1LQ86WJ1 897 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 ATP6V0A1Q93050 837 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 MRPL38Q96DV4 380 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 KRT23Q9C075 422 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 RNPEPQ9H4A4 650 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
COPS4-209ENST00000511653 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
COPS4-209ENST00000511653 EVPLQ92817 2033 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 FRMPD4Q14CM0 1322 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 GVINP1Q7Z2Y8 2422 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 GREM1O60565 184 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 CCND2P30279 289 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 NUCB1Q02818 461 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 GRM4Q14833 912 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 ZNF385CQ66K41 422 aaPredicted RBP7.66□□□□□ -1.18
COPS4-209ENST00000511653 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 CYFIP1Q7L576 1253 aa7.66□□□□□ -1.18
COPS4-209ENST00000511653 DMRTC2Q8IXT2 367 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms