RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SYN3O14994 580 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NPC1O15118 1278 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RRP8O43159 456 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 AKAP3O75969 853 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF286BP0CG31 522 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SRFP11831 508 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ODC1P11926 461 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KRT13P13646 458 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ATP2B1P20020 1258 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MCM4P33991 863 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PPP1R2P41236 205 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 AP3M2P53677 418 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF445P59923 1031 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ST8SIA6P61647 398 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ARHGAP1Q07960 439 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 COASYQ13057 564 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PRPF4BQ13523 1007 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CALCRLQ16602 461 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DUSP6Q16828 381 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 EOGTQ5NDL2 527 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 EMC10Q5UCC4 262 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NCAPH2Q6IBW4 605 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PHLDB3Q6NSJ2 640 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PLEKHM2Q8IWE5 1019 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 BLIDQ8IZY5 108 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RIN2Q8WYP3 895 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KAZALD1Q96I82 304 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 JAKMIP1Q96N16 626 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ACAP3Q96P50 834 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MTMR9Q96QG7 549 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RNPEPQ9H4A4 650 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ARHGEF3Q9NR81 526 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PDRG1Q9NUG6 133 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DDX25Q9UHL0 483 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 UBQLN1Q9UMX0 589 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ST3GAL5Q9UNP4 418 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PLAGL2Q9UPG8 496 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 COL4A3BPQ9Y5P4 624 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RBM8AQ9Y5S9 174 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 A0A1W2PRG0 241 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 POTEMA6NI47 508 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TMX2-CTNND1H3BSU7 103 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NFIBO00712 420 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KHNYNO15037 678 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PRPF3O43395 683 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CHMP2AO43633 222 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DFNA5O60443 496 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 HUS1O60921 280 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PRPF6O94906 941 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CTSAP10619 480 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GAP43P17677 238 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 EDNRBP24530 442 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 HOXA9P31269 272 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CD52P31358 61 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RECQLP46063 649 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ADAM15Q13444 863 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 LY6KQ17RY6 165 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RNF219Q5W0B1 726 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GDF6Q6KF10 455 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 LLGL2Q6P1M3 1020 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 POTEEQ6S8J3 1075 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 IL27RAQ6UWB1 636 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CACNA2D4Q7Z3S7 1137 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ADAT2Q7Z6V5 191 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RBM23Q86U06 439 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RHPN2Q8IUC4 686 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 FMNL3Q8IVF7 1028 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TRMT2AQ8IZ69 625 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KLHL23Q8NBE8 558 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PDZD8Q8NEN9 1154 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PI4K2BQ8TCG2 481 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 BAP1Q92560 729 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 C8orf76Q96K31 380 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 YTHDC1Q96MU7 727 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SLITRK1Q96PX8 696 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TTPALQ9BTX7 342 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 HERC2P3Q9BVR0 1158 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SNX25Q9H3E2 840 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 FAM124BQ9H5Z6 455 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KCND2Q9NZV8 630 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHGA5Q9Y5G8 931 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF646O15015 1829 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-209ENST00000511124 C5orf67F2Z3F1 127 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 YKT6O15498 198 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 SGSM2O43147 1006 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 CSPG5O95196 566 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 GOLGA8HP0CJ92 632 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 CSH1P0DML2 217 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 CSH2P0DML3 217 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 RALAP11233 206 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 SFTPCP11686 197 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 HOXA13P31271 388 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-209ENST00000511124 CCT6AP40227 531 aaKnown RBP3.11□□□□□ -1.91
CLOCK-209ENST00000511124 HTRA4P83105 476 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-209ENST00000511124 SIM2Q14190 667 aaPredicted RBP3.11□□□□□ -1.91
CLOCK-209ENST00000511124 KCNB1Q14721 858 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 CLUL1Q15846 466 aa3.11□□□□□ -1.91
CLOCK-209ENST00000511124 PSMD5Q16401 504 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms