RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RWDD3Q9Y3V2 267 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 PCDHGC5Q9Y5F6 944 aa17.15■□□□□ 0.34
SH3TC1-220ENST00000511002 LRRIQ4A6NIV6 560 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 ASAP2O43150 1006 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 ZNF202O95125 648 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 CASP1P29466 404 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 PBX3P40426 434 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 AFMP43652 599 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 PTENP60484 403 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 UBE2HP62256 183 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 MRPS5P82675 430 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 TFDP1Q14186 410 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 PTPROQ16827 1216 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 TJAP1Q5JTD0 557 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 UBXN11Q5T124 520 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 FAM43BQ6ZT52 329 aaPredicted RBP17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 COLGALT1Q8NBJ5 622 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 SPPL3Q8TCT6 385 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 HELQQ8TDG4 1101 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 INO80BQ9C086 356 aaPredicted RBP17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 FAM105AQ9NUU6 356 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 ODF2LQ9ULJ1 636 aa17.14■□□□□ 0.33
SH3TC1-220ENST00000511002 TBCAO75347 108 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 NR1I2O75469 434 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 FAM13AO94988 1023 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 NAMPTP43490 491 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 PEX3P56589 373 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 AMHR2Q16671 573 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 SPOUT1Q5T280 376 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 POF1BQ8WVV4 589 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 P2RX5Q93086 422 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 TRIM9Q9C026 710 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
SH3TC1-220ENST00000511002 XIRP2A4UGR9 3374 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 B4GALT5O43286 388 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 TSPAN1O60635 241 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 PLS3P13797 630 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.335e-9■■■■■ 32.7
SH3TC1-220ENST00000511002 NPTX2P47972 431 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 ZNF131P52739 623 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 DMP1Q13316 513 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 PPP2R5AQ15172 486 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 TIGD5Q53EQ6 642 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 HLA-CQ95604 372 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 NSUN3Q9H649 340 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 UBE2ZQ9H832 354 aaPredicted RBP17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 LMBRD1Q9NUN5 540 aa17.12■□□□□ 0.33
SH3TC1-220ENST00000511002 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 INO80B-WBP1J3KQ70 363 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 B4GALT3O60512 393 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 EOMESO95936 686 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 BMP1P13497 986 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 IDEP14735 1019 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 AFF1P51825 1210 aaKnown RBP17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 ASIC1P78348 528 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 CUL4BQ13620 913 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 DEPTORQ8TB45 409 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 EIF2AQ9BY44 585 aaKnown RBP17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 NFKBIZQ9BYH8 718 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 LRRC27Q9C0I9 530 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 LMAN2LQ9H0V9 348 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 COG5Q9UP83 839 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 PCDHB2Q9Y5E7 798 aa17.11■□□□□ 0.33
SH3TC1-220ENST00000511002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 TTLL13PA6NNM8 815 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 SLC16A4O15374 487 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 HOXA2O43364 376 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 FGF18O76093 207 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 AMPD3Q01432 767 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 HYAL1Q12794 435 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 CNNM4Q6P4Q7 775 aa17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-220ENST00000511002 SFR1Q86XK3 245 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms