RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CTAGE5O15320 804 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 AVPR1AP37288 418 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 TDRD12Q587J7 1177 aaKnown RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 CUEDC2Q9H467 287 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 PCDHB6Q9Y5E3 794 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 SMTNL1A8MU46 457 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 ATP9AO75110 1047 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 FAM149B1Q96BN6 582 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
LIN54-210ENST00000510877 MAP3K13O43283 966 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 CYTH3O43739 400 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 MCM3P25205 808 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 KCNB1Q14721 858 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 SLC27A1Q6PCB7 646 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 FAM213AQ9BRX8 229 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 BLZF1Q9H2G9 400 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 AGO2Q9UKV8 859 aaKnown RBP13.5□□□□□ -0.25
LIN54-210ENST00000510877 CNMDO75829 334 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
LIN54-210ENST00000510877 C4orf19Q8IY42 314 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 SLC12A6Q9UHW9 1150 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 UBQLN1Q9UMX0 589 aaKnown RBP13.5□□□□□ -0.25
LIN54-210ENST00000510877 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
LIN54-210ENST00000510877 SYCE3A1L190 88 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 MYADML2A6NDP7 307 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 YEATS4O95619 227 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 SNHG28P0DPA3 235 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 CYP11B2P19099 503 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 PLCG1P19174 1290 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 TMEM132DQ14C87 1099 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 FLCNQ8NFG4 579 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 CPB2Q96IY4 423 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 NGRNQ9NPE2 291 aaKnown RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 ITGB5P18084 799 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 PCSK1P29120 753 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 GIT2Q14161 759 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
LIN54-210ENST00000510877 MAP9Q49MG5 647 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 RNF219Q5W0B1 726 aaPredicted RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 PHOSPHO2Q8TCD6 241 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 CCDC51Q96ER9 411 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 NOC4LQ9BVI4 516 aaKnown RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 TARS2Q9BW92 718 aaKnown RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 CHST12Q9NRB3 414 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 LSM7Q9UK45 103 aaKnown RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 PCDHB2Q9Y5E7 798 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.255e-6■■■■■ 102.5
LIN54-210ENST00000510877 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 STRIP2Q9ULQ0 834 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
LIN54-210ENST00000510877 ICAM3P32942 547 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 SIAH1Q8IUQ4 282 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 SLC39A2Q9NP94 309 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 PCDHA11Q9Y5I1 949 aa13.49□□□□□ -0.25
LIN54-210ENST00000510877 SCN4AP35499 1836 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 CKMP06732 381 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 MEIS2O14770 477 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 CLTAP09496 248 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 ODC1P11926 461 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 GRIK1P39086 918 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 PDIA5Q14554 519 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 RARS2Q5T160 578 aaKnown RBP13.48□□□□□ -0.25
LIN54-210ENST00000510877 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
LIN54-210ENST00000510877 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 PLIN4Q96Q06 1357 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 NRIP1P48552 1158 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 SARNPP82979 210 aaKnown RBP13.48□□□□□ -0.25
LIN54-210ENST00000510877 SIX6OS1Q8N1H7 587 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
LIN54-210ENST00000510877 SEL1LQ9UBV2 794 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
LIN54-210ENST00000510877 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
LIN54-210ENST00000510877 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 STX17P56962 302 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 CEP68Q76N32 757 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SND1Q7KZF4 910 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIN54-210ENST00000510877 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 TMEM192Q8IY95 271 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 HERVK_113Q902F9 699 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 COL1A2P08123 1366 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 CBFA2T2O43439 604 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 F2P00734 622 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 AKAP5P24588 427 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 NNMTP40261 264 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 SCNN1GP51170 649 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 RAPGEF1Q13905 1077 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 CRACR2AQ9BSW2 395 aa13.47□□□□□ -0.25
LIN54-210ENST00000510877 PHF20Q9BVI0 1012 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms