RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 ALG13Q9NP73 1137 aaKnown RBP12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 UBN1Q9NPG3 1134 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 CFAP45Q9UL16 551 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 HES2Q9Y543 173 aa12.95□□□□□ -0.34
HMGXB3-203ENST00000510472 ABLIM1O14639 778 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 SLC16A4O15374 487 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 B4GALT3O60512 393 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 FGF18O76093 207 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 ITGA4P13612 1032 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 UBE3AQ05086 875 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 BECN1Q14457 450 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 E2F4Q16254 413 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PTPROQ16827 1216 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 CSPP1Q1MSJ5 1256 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PANK2Q9BZ23 570 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 KMT5AQ9NQR1 393 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 LARSQ9P2J5 1176 aaKnown RBP12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 GIT1Q9Y2X7 761 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PCDHB12Q9Y5F1 795 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 A0A0C4DFX4 3053 aa12.94□□□□□ -0.34
HMGXB3-203ENST00000510472 PHLPP2Q6ZVD8 1323 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 ARL5CA6NH57 179 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 MYMKA6NI61 221 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 N4BP3O15049 544 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 DDHD2O94830 711 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 NPTXRO95502 500 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 GALTP07902 379 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 PROZP22891 400 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 TXLNAP40222 546 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 BCAR1P56945 870 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 DSC1Q08554 894 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 ATF7IP2Q5U623 682 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 POF1BQ8WVV4 589 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 DNAJC19Q96DA6 116 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 GAD1Q99259 594 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 ZMYM2Q9UBW7 1377 aa12.93□□□□□ -0.34
HMGXB3-203ENST00000510472 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 FSCN2O14926 492 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 AKAP5P24588 427 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 IRS1P35568 1242 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 PBX3P40426 434 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 SMTNP53814 917 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 ERVFC1P60507 584 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 SV2BQ7L1I2 683 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 HAUS6Q7Z4H7 955 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 TMEM173Q86WV6 379 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 RASSF8Q8NHQ8 419 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 DDX12PQ92771 950 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 ZFP42Q96MM3 310 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 STRA6Q9BX79 667 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 MRPL4Q9BYD3 311 aaKnown RBP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 PARVGQ9HBI0 331 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 KBTBD4Q9NVX7 518 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
HMGXB3-203ENST00000510472 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 TRAK2O60296 914 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 EFEMP2O95967 443 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 LIG1P18858 919 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 SCP2P22307 547 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 PPM1AP35813 382 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 MLH1P40692 756 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 SLC11A1P49279 550 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 GTF2BQ00403 316 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
HMGXB3-203ENST00000510472 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms