RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 FOXN3O00409 490 aaPredicted RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 LSM1O15116 133 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 WDR46O15213 610 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SPTLC2O15270 562 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 BIRC5O15392 142 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 TSPAN1O60635 241 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 FSBPO95073 299 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SLU7O95391 586 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 STAMBPO95630 424 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 CAVIN2O95810 425 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 MBD3O95983 291 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 GNAT2P19087 354 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 KCNJ6P48051 423 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 PMS2P54278 862 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 GABREP78334 506 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 BASP1P80723 227 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 IFFO1Q0D2I5 559 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 CCDC153Q494R4 210 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 FNDC3BQ53EP0 1204 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 CCDC93Q567U6 631 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 MIS18BP1Q6P0N0 1132 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SLC23A3Q6PIS1 610 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 FIP1L1Q6UN15 594 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 ZNF804AQ7Z570 1209 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SLCO6A1Q86UG4 719 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 KSR1Q8IVT5 923 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 ITPRIPQ8IWB1 547 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 PPIL6Q8IXY8 311 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 LSMEM2Q8N112 164 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 RNF10Q8N5U6 811 aaKnown RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SYT2Q8N9I0 419 aaPredicted RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SLC7A14Q8TBB6 771 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 PTPRN2Q92932 1015 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 GTF3C6Q969F1 213 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 HVCN1Q96D96 273 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SNX27Q96L92 541 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SEMA4AQ9H3S1 761 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 SLC52A2Q9HAB3 445 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 PRDM7Q9NQW5 492 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 ATXN10Q9UBB4 475 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 TMEM59LQ9UK28 342 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 TRAF3IP3Q9Y228 551 aa5.46□□□□□ -1.54
CCDC30-213ENST00000509712 GAKO14976 1311 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 MTUS2Q5JR59 1369 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 ANKRD36BQ8N2N9 1353 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TNIKQ9UKE5 1360 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 A6NNZ2 444 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 NOTOA8MTQ0 251 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 B4DLN1 442 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 MEFVO15553 781 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 KPNA6O60684 536 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 SNX2O60749 519 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 RNASEH2AO75792 299 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 RAPGEF3O95398 923 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 EFEMP2O95967 443 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 PDGFRBP09619 1106 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 PAMP19021 973 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 S100A1P23297 94 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 OAS2P29728 719 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CNGA1P29973 690 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 HOXC13P31276 330 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 GNL1P36915 607 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CDK17Q00537 523 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 DR1Q01658 176 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 MRPL28Q13084 256 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 KCNAB2Q13303 367 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 PTPN14Q15678 1187 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TUBB8Q3ZCM7 444 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 C10orf76Q5T2E6 689 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 VPS53Q5VIR6 699 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 PDXDC1Q6P996 788 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 RSPO2Q6UXX9 243 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 USP53Q70EK8 1073 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 NLRP9Q7RTR0 991 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 MAMDC2Q7Z304 686 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 RAB11FIP4Q86YS3 637 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CARNMT1Q8N4J0 409 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TNIP2Q8NFZ5 429 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 DCAF4Q8WV16 495 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CDKL2Q92772 493 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 KAT2BQ92831 832 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 HPS3Q969F9 1004 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 ZNF653Q96CK0 615 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CFAP36Q96G28 342 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 ANKRD27Q96NW4 1050 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TSC22D3Q99576 134 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 FAM167BQ9BTA0 163 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 ADAMTS10Q9H324 1103 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TTC12Q9H892 705 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 CLK4Q9HAZ1 481 aaKnown RBP5.45□□□□□ -1.54
CCDC30-213ENST00000509712 FKBP14Q9NWM8 211 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 MIS18AQ9NYP9 233 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 SLAMF8Q9P0V8 285 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 FAM184BQ9ULE4 1060 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 TPCN1Q9ULQ1 816 aa5.45□□□□□ -1.54
CCDC30-213ENST00000509712 PLAAQ9Y263 795 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms