RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
RNF4-213ENST00000509388 CLDN3O15551 220 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 TOM1L1O75674 476 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 AMHP03971 560 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 HOXA11P31270 313 aaPredicted RBP16.25■□□□□ 0.19
RNF4-213ENST00000509388 PPP1R2P41236 205 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 KNOP1Q1ED39 458 aaKnown RBP16.25■□□□□ 0.19
RNF4-213ENST00000509388 SLFN12LQ6IEE8 588 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 EPM2AIP1Q7L775 607 aaPredicted RBP16.25■□□□□ 0.19
RNF4-213ENST00000509388 HS2ST1Q7LGA3 356 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 ZBTB33Q86T24 672 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 CDR2LQ86X02 465 aaPredicted RBP16.25■□□□□ 0.19
RNF4-213ENST00000509388 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 GBP3Q9H0R5 595 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
RNF4-213ENST00000509388 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
RNF4-213ENST00000509388 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 MGEA5O60502 916 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 NPTXRO95502 500 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 PIGRP01833 764 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 HARSP12081 509 aaKnown RBP16.24■□□□□ 0.19
RNF4-213ENST00000509388 RAB27AP51159 221 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 KCNA1Q09470 495 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 MORC3Q14149 939 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 DSC3Q14574 896 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 BMT2Q1RMZ1 405 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 DCAF4L1Q3SXM0 396 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 ZNF568Q3ZCX4 644 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 MPZL3Q6UWV2 235 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
RNF4-213ENST00000509388 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
RNF4-213ENST00000509388 RNF169Q8NCN4 708 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 GOLGA5Q8TBA6 731 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 HERVK_113Q902F9 699 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 VWCEQ96DN2 955 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 PDZD7Q9H5P4 517 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 PCDHB7Q9Y5E2 793 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 SLC4A7Q9Y6M7 1214 aa16.24■□□□□ 0.19
RNF4-213ENST00000509388 A0A0U1RQF3 1178 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 RBAK-RBAKDNI3L0D1 243 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 PSMA7O14818 248 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 CALUO43852 315 aaPredicted RBP16.23■□□□□ 0.19
RNF4-213ENST00000509388 EDN1P05305 212 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 MCF2P10911 925 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 TCTN1Q2MV58 587 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
RNF4-213ENST00000509388 RTN4RL1Q86UN2 441 aaPredicted RBP16.23■□□□□ 0.19
RNF4-213ENST00000509388 POMGNT1Q8WZA1 660 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 PGBD4Q96DM1 585 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
RNF4-213ENST00000509388 GDF15Q99988 308 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 DACH1Q9UI36 760 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 PCDHB2Q9Y5E7 798 aa16.23■□□□□ 0.19
RNF4-213ENST00000509388 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 ANKRD63C9JTQ0 380 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 UPP2O95045 317 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 PRCPP42785 496 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 NLRP12P59046 1061 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 WDR5P61964 334 aaKnown RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 SNRPFP62306 86 aaKnown RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 NOLC1Q14978 699 aaKnown RBP eCLIP16.22■□□□□ 0.19
RNF4-213ENST00000509388 UBXN11Q5T124 520 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 ARMCX5Q6P1M9 558 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 MLKLQ8NB16 471 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 LINC01599Q8WXQ3 324 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 DHTKD1Q96HY7 919 aaPredicted RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 ZBTB45Q96K62 511 aaPredicted RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 TSG101Q99816 390 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 TRAIPQ9BWF2 469 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 EIF2AQ9BY44 585 aaKnown RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 PTPRHQ9HD43 1115 aa16.22■□□□□ 0.19
RNF4-213ENST00000509388 CGNQ9P2M7 1197 aaKnown RBP16.22■□□□□ 0.19
RNF4-213ENST00000509388 TANC1Q9C0D5 1861 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 C9IYK1 514 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 TULP1O00294 542 aaPredicted RBP16.21■□□□□ 0.19
RNF4-213ENST00000509388 PDXKO00764 312 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 EOMESO95936 686 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 ITGA4P13612 1032 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 GARTP22102 1010 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 PROZP22891 400 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 BMP8BP34820 402 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 MCL1Q07820 350 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 SHHQ15465 462 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 KYAT1Q16773 422 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 COBLL1Q53SF7 1204 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 KLHL10Q6JEL2 608 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
RNF4-213ENST00000509388 ECHDC2Q86YB7 292 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 THNSL1Q8IYQ7 743 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 ADSSL1Q8N142 457 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 NOC3LQ8WTT2 800 aaKnown RBP16.21■□□□□ 0.19
RNF4-213ENST00000509388 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 CCDC94Q9BW85 323 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms