RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TNPO3Q9Y5L0 923 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 DOCK2Q92608 1830 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ADCY9O60503 1353 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CAPN9O14815 690 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 IKBKBO14920 756 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 S100A9P06702 114 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ATP1A3P13637 1013 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 GCFC2P16383 781 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 XPAP23025 273 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CHMP24386 653 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 IGFALSP35858 605 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 NT5C2P49902 561 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ATP8B2P98198 1209 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 GALNT1Q10472 559 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ANKDD1AQ495B1 522 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TTC19Q6DKK2 380 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 RETSATQ6NUM9 610 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZYG11AQ6WRX3 759 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 FAM26EQ8N5C1 309 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SPATA18Q8TC71 538 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 BCAS4Q8TDM0 211 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TEKT1Q969V4 418 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CCDC94Q9BW85 323 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SRA1Q9HD15 236 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 DDX28Q9NUL7 540 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 HPCAL4Q9UM19 191 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 MYH7P12883 1935 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 LAMA4Q16363 1823 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 C4AP0C0L4 1744 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 C4BP0C0L5 1744 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 VGLL3A8MV65 326 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SOAT2O75908 522 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 UPP2O95045 317 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 STAU1O95793 577 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 NAT1P18440 290 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SLC7A1P30825 629 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 GDI1P31150 447 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CDK17Q00537 523 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CDC16Q13042 620 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 GALNT17Q6IS24 598 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ERAP2Q6P179 960 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 APOA5Q6Q788 366 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TCEAL8Q8IYN2 117 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZBTB38Q8NAP3 1195 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 KCTD13Q8WZ19 329 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 FUBP3Q96I24 572 aaKnown RBP eCLIP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SUCLG2Q96I99 432 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF845Q96IR2 970 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PPM1MQ96MI6 270 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SLC9A7Q96T83 725 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ATP6V0A2Q9Y487 856 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 hCG_1807616A0A1W2PRN6 198 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SPECC1L-ADORA2AF8WAN1 911 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 TOM1O60784 492 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 STAMBPO95630 424 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 FGAP02671 866 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ALOX12P18054 663 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 EIF2S2P20042 333 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CCR9P51686 369 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 YWHAHQ04917 246 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 COX10Q12887 443 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF460Q14592 562 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 HSP90AA4PQ58FG1 418 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 MUM1L1Q5H9M0 696 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF790Q6PG37 636 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 CEP97Q8IW35 865 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 SYCE1Q8N0S2 351 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ZBTB34Q8NCN2 500 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 URGCPQ8TCY9 931 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 GPKOWQ92917 476 aaPredicted RBP eCLIP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 STRBPQ96SI9 672 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 NOC4LQ9BVI4 516 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 NPDC1Q9NQX5 325 aaPredicted RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 INTS10Q9NVR2 710 aaKnown RBP4.22□□□□□ -1.73
NEDD4-209ENST00000508871 ALKBH4Q9NXW9 302 aa4.22□□□□□ -1.73
NEDD4-209ENST00000508871 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 A6NJY4 79 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 SOCS7O14512 581 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ZBTB39O15060 712 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 WDR46O15213 610 aaKnown RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 RIPK2O43353 540 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 FZD6O60353 706 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 PDHBP11177 359 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ARL4DP49703 201 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 BCAMP50895 628 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 CBLBQ13191 982 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 SKOR2Q2VWA4 1001 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ARHGAP27Q6ZUM4 889 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 RASGRP2Q7LDG7 609 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 TTC5Q8N0Z6 440 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 DNAAF4Q8WXU2 420 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 CFAP36Q96G28 342 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 CNDP1Q96KN2 507 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 KCTD15Q96SI1 283 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ZSCAN10Q96SZ4 725 aaPredicted RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ASPSCR1Q9BZE9 553 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 PPANQ9NQ55 473 aaKnown RBP4.21□□□□□ -1.73
NEDD4-209ENST00000508871 KIAA1468Q9P260 1216 aa4.21□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF711Q9Y462 761 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms