RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 LILRA3Q8N6C8 439 aaPredicted RBP9.53□□□□□ -0.88
CHD1-205ENST00000508756 DVL3Q92997 716 aaPredicted RBP9.53□□□□□ -0.88
CHD1-205ENST00000508756 ARL8AQ96BM9 186 aa9.53□□□□□ -0.88
CHD1-205ENST00000508756 FUBP3Q96I24 572 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHD1-205ENST00000508756 PAWRQ96IZ0 340 aaKnown RBP9.53□□□□□ -0.88
CHD1-205ENST00000508756 ADOQ96SZ5 270 aa9.53□□□□□ -0.88
CHD1-205ENST00000508756 PCDHGA2Q9Y5H1 932 aa9.53□□□□□ -0.88
CHD1-205ENST00000508756 TNKSO95271 1327 aa9.53□□□□□ -0.88
CHD1-205ENST00000508756 SHTN1A0MZ66 631 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 AKR1B10O60218 316 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA12O60330 932 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 RBP3P10745 1247 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 MALLQ13021 153 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 ACAP2Q15057 778 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 ANO4Q32M45 955 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 MUM1L1Q5H9M0 696 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 FKBP15Q5T1M5 1219 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA9Q9Y5G4 932 aaKnown RBP9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA8Q9Y5G5 932 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA7Q9Y5G6 932 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA6Q9Y5G7 932 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 PCDHGA3Q9Y5H0 932 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 RPTORQ8N122 1335 aa9.52□□□□□ -0.89
CHD1-205ENST00000508756 XPOTO43592 962 aaKnown RBP9.51□□□□□ -0.89
CHD1-205ENST00000508756 ADSLP30566 484 aaPredicted RBP9.51□□□□□ -0.89
CHD1-205ENST00000508756 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 PPP3CAQ08209 521 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 R3HDM1Q15032 1099 aaKnown RBP9.51□□□□□ -0.89
CHD1-205ENST00000508756 CDSNQ15517 529 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 PTPN21Q16825 1174 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 MAMDC4Q6UXC1 1216 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 PPM1NQ8N819 430 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 GPR156Q8NFN8 814 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 ZNF480Q8WV37 535 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 JADE3Q92613 823 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
CHD1-205ENST00000508756 GREM2Q9H772 168 aa9.51□□□□□ -0.89
CHD1-205ENST00000508756 HECAQ9UBI9 543 aaPredicted RBP9.51□□□□□ -0.89
CHD1-205ENST00000508756 ADCY6O43306 1168 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 ITGA10O75578 1167 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 GYPEP15421 78 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 MST1LQ2TV78 715 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 SPTY2D1Q68D10 685 aaPredicted RBP9.5□□□□□ -0.89
CHD1-205ENST00000508756 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 MPHOSPH9Q99550 1183 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 C1QTNF3Q9BXJ4 246 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 GPRC5DQ9NZD1 345 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
CHD1-205ENST00000508756 CAPN14A8MX76 684 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 MUSKO15146 869 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 MCAMP43121 646 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 HHEXQ03014 270 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 ELAVL1Q15717 326 aaKnown RBP9.49□□□□□ -0.89
CHD1-205ENST00000508756 Q6ZVL8 140 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 EDAQ92838 391 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 IL17RAQ96F46 866 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 FAM89AQ96GI7 184 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 ADI1Q9BV57 179 aa9.49□□□□□ -0.89
CHD1-205ENST00000508756 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
CHD1-205ENST00000508756 KLHL33A6NCF5 533 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 C5AR1P21730 350 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 GZMKP49863 264 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 ELOA2Q8IYF1 753 aaPredicted RBP9.48□□□□□ -0.89
CHD1-205ENST00000508756 MDM1Q8TC05 714 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 DDX56Q9NY93 547 aaKnown RBP9.48□□□□□ -0.89
CHD1-205ENST00000508756 TRPS1Q9UHF7 1281 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 TUBD1Q9UJT1 453 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 DNM3Q9UQ16 869 aa9.48□□□□□ -0.89
CHD1-205ENST00000508756 HOXA3O43365 443 aaPredicted RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 PHF2O75151 1096 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 ADRB1P08588 477 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 MRPL49Q13405 166 aaKnown RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 PRKD1Q15139 912 aaPredicted RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 PNMA8AQ86V59 439 aaPredicted RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 SSH1Q8WYL5 1049 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 TEKT5Q96M29 485 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
CHD1-205ENST00000508756 TSC22D4Q9Y3Q8 395 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 ZMYM3Q14202 1370 aa9.47□□□□□ -0.89
CHD1-205ENST00000508756 NDUFS2O75306 463 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 ECHS1P30084 290 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 HIBADHP31937 336 aaKnown RBP9.46□□□□□ -0.9
CHD1-205ENST00000508756 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.9
CHD1-205ENST00000508756 ODF1Q14990 250 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 SPDYAQ5MJ70 313 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 PRAMEF14Q5SWL7 426 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 MFSD5Q6N075 450 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 MB21D1Q8N884 522 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 FBXO18Q8NFZ0 1043 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 OR2I1PQ8NGU4 316 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 HOXB13Q92826 284 aaPredicted RBP9.46□□□□□ -0.9
CHD1-205ENST00000508756 MRFAP1Q9Y605 127 aa9.46□□□□□ -0.9
CHD1-205ENST00000508756 APBA1Q02410 837 aa9.45□□□□□ -0.9
CHD1-205ENST00000508756 SEPT2Q15019 361 aa9.45□□□□□ -0.9
CHD1-205ENST00000508756 NRG4Q8WWG1 115 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms