RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CSRNP2Q9H175 543 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 DBR1Q9UK59 544 aaKnown RBP18.01■□□□□ 0.47
LMNA-222ENST00000508500 IRAK3Q9Y616 596 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 DOCK6Q96HP0 2047 aa18■□□□□ 0.47
LMNA-222ENST00000508500 TTLL13PA6NNM8 815 aa18■□□□□ 0.47
LMNA-222ENST00000508500 NRP1O14786 923 aa18■□□□□ 0.47
LMNA-222ENST00000508500 INPPL1O15357 1258 aa18■□□□□ 0.47
LMNA-222ENST00000508500 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
LMNA-222ENST00000508500 CTSAP10619 480 aa18■□□□□ 0.47
LMNA-222ENST00000508500 ITGA4P13612 1032 aa18■□□□□ 0.47
LMNA-222ENST00000508500 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
LMNA-222ENST00000508500 RPA1P27694 616 aa18■□□□□ 0.47
LMNA-222ENST00000508500 ORC2Q13416 577 aaPredicted RBP18■□□□□ 0.47
LMNA-222ENST00000508500 TFDP1Q14186 410 aa18■□□□□ 0.47
LMNA-222ENST00000508500 PCBP1Q15365 356 aaKnown RBP eCLIP18■□□□□ 0.472e-6■□□□□ 9
LMNA-222ENST00000508500 KANK3Q6NY19 840 aa18■□□□□ 0.47
LMNA-222ENST00000508500 NOTUMQ6P988 496 aa18■□□□□ 0.47
LMNA-222ENST00000508500 BMP8AQ7Z5Y6 402 aa18■□□□□ 0.47
LMNA-222ENST00000508500 ALYREFQ86V81 257 aaKnown RBP18■□□□□ 0.47
LMNA-222ENST00000508500 BSNDQ8WZ55 320 aa18■□□□□ 0.47
LMNA-222ENST00000508500 EDAQ92838 391 aa18■□□□□ 0.47
LMNA-222ENST00000508500 ZFP42Q96MM3 310 aa18■□□□□ 0.47
LMNA-222ENST00000508500 EFEMP2O95967 443 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 EDN1P05305 212 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 COLGALT2Q8IYK4 626 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 CNNM3Q8NE01 707 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 GSTCDQ8NEC7 633 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 URGCPQ8TCY9 931 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 SLC22A17Q8WUG5 538 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 NACC1Q96RE7 527 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 GAD1Q99259 594 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 TMEM175Q9BSA9 504 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 NXF3Q9H4D5 531 aaKnown RBP17.99■□□□□ 0.47
LMNA-222ENST00000508500 POLD4Q9HCU8 107 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 MARCH5Q9NX47 278 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 VWA8A3KMH1 1905 aa17.99■□□□□ 0.47
LMNA-222ENST00000508500 A0A1B0GUA9 196 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.98■□□□□ 0.47
LMNA-222ENST00000508500 ARL5CA6NH57 179 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 F8W810 466 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 LILRB3O75022 631 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 EPCAMP16422 314 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 CA8P35219 290 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 MLH1P40692 756 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 TRAPPC10P48553 1259 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.475e-7■■□□□ 11.5
LMNA-222ENST00000508500 DSC1Q08554 894 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 IL17AQ16552 155 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 CDCA2Q69YH5 1023 aaPredicted RBP17.98■□□□□ 0.47
LMNA-222ENST00000508500 PADI6Q6TGC4 694 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 TAS1R1Q7RTX1 841 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 CASP10Q92851 521 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 CCDC51Q96ER9 411 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
LMNA-222ENST00000508500 KANSL3Q9P2N6 904 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 USP20Q9Y2K6 914 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 FAN1Q9Y2M0 1017 aa17.98■□□□□ 0.47
LMNA-222ENST00000508500 LRRIQ4A6NIV6 560 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 ALDH2P05091 517 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 HOXB8P17481 243 aaPredicted RBP17.97■□□□□ 0.47
LMNA-222ENST00000508500 AKAP5P24588 427 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 MRE11P49959 708 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 SCNN1GP51170 649 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 RNF168Q8IYW5 571 aaPredicted RBP17.97■□□□□ 0.47
LMNA-222ENST00000508500 C12orf76Q8N812 135 aaPredicted RBP17.97■□□□□ 0.47
LMNA-222ENST00000508500 APOL6Q9BWW8 343 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 FZD8Q9H461 694 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 UBN1Q9NPG3 1134 aa17.97■□□□□ 0.47
LMNA-222ENST00000508500 CITO14578 2027 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 CARNS1A5YM72 827 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 NPTXRO95502 500 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.47
LMNA-222ENST00000508500 WEE2P0C1S8 567 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 SRGAP2BP0DMP2 458 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 CYP11B2P19099 503 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 PTGDRQ13258 359 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 RABEP1Q15276 862 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 IGSF22Q8N9C0 903 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 MCPH1Q8NEM0 835 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 KLHL5Q96PQ7 755 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 FAM193BQ96PV7 902 aaPredicted RBP17.96■□□□□ 0.47
LMNA-222ENST00000508500 BACH2Q9BYV9 841 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 CCDC113Q9H0I3 377 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 CXCL16Q9H2A7 254 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 ADAM7Q9H2U9 754 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 POMKQ9H5K3 350 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 PRG3Q9Y2Y8 225 aaPredicted RBP17.96■□□□□ 0.47
LMNA-222ENST00000508500 ZDBF2Q9HCK1 2354 aa17.96■□□□□ 0.47
LMNA-222ENST00000508500 DOCK8Q8NF50 2099 aa17.95■□□□□ 0.46
LMNA-222ENST00000508500 CNPP09543 421 aaKnown RBP17.95■□□□□ 0.46
LMNA-222ENST00000508500 MUTP22033 750 aa17.95■□□□□ 0.46
LMNA-222ENST00000508500 OR1G1P47890 313 aa17.95■□□□□ 0.46
LMNA-222ENST00000508500 GNL2Q13823 731 aaKnown RBP17.95■□□□□ 0.46
LMNA-222ENST00000508500 GIT2Q14161 759 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms