RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TMEM175Q9BSA9 504 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 CSRNP2Q9H175 543 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 ADAM7Q9H2U9 754 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 UBN1Q9NPG3 1134 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 GPRC5CQ9NQ84 441 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 MARCH5Q9NX47 278 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 KANSL3Q9P2N6 904 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 KMT2EQ8IZD2 1858 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 C2orf16Q68DN1 1984 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 ARL5CA6NH57 179 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 B4GALT5O43286 388 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 ITGA4P13612 1032 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 EPCAMP16422 314 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 SP100P23497 879 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 DSC1Q08554 894 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 ORC2Q13416 577 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 TRIM67Q6ZTA4 783 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 SLC22A17Q8WUG5 538 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 ZFP42Q96MM3 310 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 NECTIN4Q96NY8 510 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 GAD1Q99259 594 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 FOXP1Q9H334 677 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 NXF3Q9H4D5 531 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 POMKQ9H5K3 350 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 TUFT1Q9NNX1 390 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 DBR1Q9UK59 544 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 PLXNA3P51805 1871 aa14.44□□□□□ -0.1
HMGCS1-205ENST00000508319 NRP1O14786 923 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 LILRB3O75022 631 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 OR52Z1P0C646 297 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 SCNN1GP51170 649 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 HMGN5P82970 282 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 C8orf34Q49A92 452 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 CDCA2Q69YH5 1023 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 CES5AQ6NT32 575 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 NOSTRINQ8IVI9 506 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 COLGALT2Q8IYK4 626 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 C12orf76Q8N812 135 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 FAM193BQ96PV7 902 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 SH2B1Q9NRF2 756 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 STK39Q9UEW8 545 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 FAN1Q9Y2M0 1017 aa14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 PRG3Q9Y2Y8 225 aaPredicted RBP14.43□□□□□ -0.1
HMGCS1-205ENST00000508319 MYO10Q9HD67 2058 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 A0A1B0GUA9 196 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 TMEM221A6NGB7 291 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 F8W810 466 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 M0R296 226 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 EFEMP2O95967 443 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 SOD2P04179 222 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 ALDH2P05091 517 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 SSBP05455 408 aaKnown RBP eCLIP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 WEE2P0C1S8 567 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 RPA1P27694 616 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 RBM25P49756 843 aaKnown RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 NCBP1Q09161 790 aaKnown RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 ZNF174Q15697 407 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 TTC38Q5R3I4 469 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 KIAA1841Q6NSI8 718 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 KANK3Q6NY19 840 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 SLC27A1Q6PCB7 646 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 MAEAQ7L5Y9 396 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 BMP8AQ7Z5Y6 402 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 CDR2LQ86X02 465 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 RNF168Q8IYW5 571 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 GSTCDQ8NEC7 633 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 MCPH1Q8NEM0 835 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 ERMNQ8TAM6 284 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 BSNDQ8WZ55 320 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 ZSCAN31Q96LW9 406 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 MFSD14AQ96MC6 490 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 KLHL5Q96PQ7 755 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 APOL6Q9BWW8 343 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 TRIM6Q9C030 488 aaPredicted RBP14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 MIOSQ9NXC5 875 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 GIT1Q9Y2X7 761 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 NR2E1Q9Y466 385 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 CACNA1HO95180 2353 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 ZMYM2Q9UBW7 1377 aa14.42□□□□□ -0.1
HMGCS1-205ENST00000508319 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 C2CD4DB7Z1M9 353 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 NPTXRO95502 500 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 CNPP09543 421 aaKnown RBP14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 AKAP5P24588 427 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 MTHFRP42898 656 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 CLCN4P51793 760 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 SIGLEC14Q08ET2 396 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 NBR1Q14596 966 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 PPFIBP1Q86W92 1011 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 TMEM87AQ8NBN3 555 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 ASIC4Q96FT7 647 aa14.41□□□□□ -0.1
HMGCS1-205ENST00000508319 PRIMPOLQ96LW4 560 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms