RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GBP3Q9H0R5 595 aa22■■□□□ 1.11
USP53-203ENST00000507597 DACH1Q9UI36 760 aa22■■□□□ 1.11
USP53-203ENST00000507597 LRFN2Q9ULH4 789 aa22■■□□□ 1.11
USP53-203ENST00000507597 ENPP3O14638 875 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 KIAA0391O15091 583 aaKnown RBP21.99■■□□□ 1.11
USP53-203ENST00000507597 PRPF6O94906 941 aaKnown RBP21.99■■□□□ 1.11
USP53-203ENST00000507597 SLC34A2O95436 690 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 DSC3Q14574 896 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 KNOP1Q1ED39 458 aaKnown RBP21.99■■□□□ 1.11
USP53-203ENST00000507597 EPM2AIP1Q7L775 607 aaPredicted RBP21.99■■□□□ 1.11
USP53-203ENST00000507597 OTOP2Q7RTS6 562 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 CPB2Q96IY4 423 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 GDF15Q99988 308 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.99■■□□□ 1.11
USP53-203ENST00000507597 TARS2Q9BW92 718 aaKnown RBP21.99■■□□□ 1.11
USP53-203ENST00000507597 UBN1Q9NPG3 1134 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 MAN1B1Q9UKM7 699 aa21.99■■□□□ 1.11
USP53-203ENST00000507597 A0A0U1RQF3 1178 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 HOXA2O43364 376 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 CALUO43852 315 aaPredicted RBP21.98■■□□□ 1.11
USP53-203ENST00000507597 EOMESO95936 686 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 HOXA11P31270 313 aaPredicted RBP21.98■■□□□ 1.11
USP53-203ENST00000507597 CAVIN1Q6NZI2 390 aaKnown RBP21.98■■□□□ 1.11
USP53-203ENST00000507597 MPZL3Q6UWV2 235 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 TAS1R3Q7RTX0 852 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 PHOSPHO2Q8TCD6 241 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 HPS3Q969F9 1004 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 TMX1Q9H3N1 280 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 ELAC1Q9H777 363 aaKnown RBP21.98■■□□□ 1.11
USP53-203ENST00000507597 PCDHB7Q9Y5E2 793 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 SLC4A7Q9Y6M7 1214 aa21.98■■□□□ 1.11
USP53-203ENST00000507597 PSMA7O14818 248 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 B4GALT5O43286 388 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 ZNF623O75123 536 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 LDHAP00338 332 aaKnown RBP21.97■■□□□ 1.11
USP53-203ENST00000507597 MCF2P10911 925 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 MORC3Q14149 939 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 ZNF568Q3ZCX4 644 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 MLKLQ8NB16 471 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 KIAA0895Q8NCT3 520 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 SCFD1Q8WVM8 642 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 ERCC4Q92889 916 aaPredicted RBP21.97■■□□□ 1.11
USP53-203ENST00000507597 SLC9A7Q96T83 725 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 TSG101Q99816 390 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 OSBPL7Q9BZF2 842 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 FAM105AQ9NUU6 356 aa21.97■■□□□ 1.11
USP53-203ENST00000507597 GARTP22102 1010 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 CASP5P51878 434 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 NOLC1Q14978 699 aaKnown RBP eCLIP21.96■■□□□ 1.11
USP53-203ENST00000507597 C16orf59Q7L2K0 433 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 NPAS4Q8IUM7 802 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 NELFCDQ8IXH7 590 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 POMGNT1Q8WZA1 660 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 DHTKD1Q96HY7 919 aaPredicted RBP21.96■■□□□ 1.11
USP53-203ENST00000507597 RNPC3Q96LT9 517 aaKnown RBP21.96■■□□□ 1.11
USP53-203ENST00000507597 PDZD7Q9H5P4 517 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 TYW1Q9NV66 732 aaKnown RBP21.96■■□□□ 1.11
USP53-203ENST00000507597 TMEM161AQ9NX61 479 aa21.96■■□□□ 1.11
USP53-203ENST00000507597 LTBP2Q14767 1821 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 C9IYK1 514 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 BIN1O00499 593 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 PDXKO00764 312 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 FAM189BP81408 668 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 MCL1Q07820 350 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 CT47A1Q5JQC4 288 aaPredicted RBP21.95■■□□□ 1.1
USP53-203ENST00000507597 ARMCX5Q6P1M9 558 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 RBM43Q6ZSC3 357 aaKnown RBP21.95■■□□□ 1.1
USP53-203ENST00000507597 CCDC94Q9BW85 323 aaPredicted RBP21.95■■□□□ 1.1
USP53-203ENST00000507597 KIAA1586Q9HCI6 787 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 ANKFY1Q9P2R3 1169 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 GDAQ9Y2T3 454 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 PCDHB2Q9Y5E7 798 aa21.95■■□□□ 1.1
USP53-203ENST00000507597 BICDL2A1A5D9 508 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 NPTXRO95502 500 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 ITGA4P13612 1032 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 PROZP22891 400 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 RPL13P26373 211 aaKnown RBP21.94■■□□□ 1.1
USP53-203ENST00000507597 YARSP54577 528 aaKnown RBP21.94■■□□□ 1.1
USP53-203ENST00000507597 NLRP12P59046 1061 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 WDR5P61964 334 aaKnown RBP21.94■■□□□ 1.1
USP53-203ENST00000507597 MYBPC2Q14324 1141 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 ISM2Q6H9L7 571 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 MSTO1Q9BUK6 570 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 PTPRHQ9HD43 1115 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 TOPORSQ9NS56 1045 aaPredicted RBP21.94■■□□□ 1.1
USP53-203ENST00000507597 STYXL1Q9Y6J8 313 aa21.94■■□□□ 1.1
USP53-203ENST00000507597 MKI67P46013 3256 aaKnown RBP21.93■■□□□ 1.1
USP53-203ENST00000507597 OGTO15294 1046 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 MGEA5O60502 916 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 EPHB4P54760 987 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 POU5F1Q01860 360 aaKnown RBP21.93■■□□□ 1.1
USP53-203ENST00000507597 MRPL10Q7Z7H8 261 aaKnown RBP21.93■■□□□ 1.1
USP53-203ENST00000507597 RTN4RL1Q86UN2 441 aaPredicted RBP21.93■■□□□ 1.1
USP53-203ENST00000507597 ABI1Q8IZP0 508 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 TOP1MTQ969P6 601 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 VWCEQ96DN2 955 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 FGFBP2Q9BYJ0 223 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 ANO10Q9NW15 660 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 TMEM63CQ9P1W3 806 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms