RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 RHPN2Q8IUC4 686 aa15.61■□□□□ 0.09
DDR1-260ENST00000507533 RNF168Q8IYW5 571 aaPredicted RBP15.61■□□□□ 0.09
DDR1-260ENST00000507533 LTB4R2Q9NPC1 389 aa15.61■□□□□ 0.09
DDR1-260ENST00000507533 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
DDR1-260ENST00000507533 RALYQ9UKM9 306 aaKnown RBP15.61■□□□□ 0.09
DDR1-260ENST00000507533 USP24Q9UPU5 2620 aa15.61■□□□□ 0.09
DDR1-260ENST00000507533 SGSM2O43147 1006 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 EFEMP2O95967 443 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 FUT2Q10981 343 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 LILRA6Q6PI73 481 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 RSPO2Q6UXX9 243 aaPredicted RBP15.6■□□□□ 0.09
DDR1-260ENST00000507533 MTSS1LQ765P7 747 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 GLYCTKQ8IVS8 523 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 KSR1Q8IVT5 923 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 COLGALT2Q8IYK4 626 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 NLRP4Q96MN2 994 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 NIFKQ9BYG3 293 aaKnown RBP15.6■□□□□ 0.09
DDR1-260ENST00000507533 AGPAT5Q9NUQ2 364 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 SEPT9Q9UHD8 586 aaPredicted RBP15.6■□□□□ 0.09
DDR1-260ENST00000507533 CDH7Q9ULB5 785 aa15.6■□□□□ 0.09
DDR1-260ENST00000507533 IGKV6-21A0A0C4DH24 114 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 SLC30A4O14863 429 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 CHMP2AO43633 222 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 ZMYND10O75800 440 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 PFKPQ01813 784 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 SPEM2Q0P670 501 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 TTC22Q5TAA0 569 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 GRASPQ7Z6J2 395 aaPredicted RBP15.59■□□□□ 0.09
DDR1-260ENST00000507533 SGMS1Q86VZ5 419 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 NETO1Q8TDF5 533 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 CLDN23Q96B33 292 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 B3GALT6Q96L58 329 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 CEP89Q96ST8 783 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 SH2D3AQ9BRG2 576 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDR1-260ENST00000507533 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 RAB23Q9ULC3 237 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.59■□□□□ 0.09
DDR1-260ENST00000507533 COL4A3Q01955 1670 aa15.59■□□□□ 0.09
DDR1-260ENST00000507533 MYH9P35579 1960 aaKnown RBP15.58■□□□□ 0.09
DDR1-260ENST00000507533 TMEM150BA6NC51 233 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 F8W810 466 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 ADAMTS3O15072 1205 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 NCAM2O15394 837 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 SFNP31947 248 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 JAK3P52333 1124 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 NTHL1P78549 312 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 RTN1Q16799 776 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 XKR3Q5GH77 459 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 LENG9Q96B70 501 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 NELL2Q99435 816 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 FAM126AQ9BYI3 521 aaPredicted RBP15.58■□□□□ 0.08
DDR1-260ENST00000507533 UBN1Q9NPG3 1134 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 PRMT8Q9NR22 394 aaPredicted RBP15.58■□□□□ 0.08
DDR1-260ENST00000507533 FNIP2Q9P278 1114 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 DOCK8Q8NF50 2099 aa15.58■□□□□ 0.08
DDR1-260ENST00000507533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 MSH4O15457 936 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 GAS7O60861 476 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 MAFO75444 373 aaPredicted RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 NR1I2O75469 434 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 ITGA4P13612 1032 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 NCLP19338 710 aaKnown RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 TARSP26639 723 aaKnown RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 CIITAP33076 1130 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 LPAL2Q16609 132 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 APOA5Q6Q788 366 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 TPRG1Q6ZUI0 275 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 FGF13Q92913 245 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 KXD1Q9BQD3 176 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 COLEC11Q9BWP8 271 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 UNC45AQ9H3U1 944 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 IFT122Q9HBG6 1241 aa15.57■□□□□ 0.08
DDR1-260ENST00000507533 FAM217BQ9NTX9 383 aaPredicted RBP15.57■□□□□ 0.08
DDR1-260ENST00000507533 BAHCC1Q9P281 2608 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 STBD1O95210 358 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 KCNA4P22459 653 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 HOXA11P31270 313 aaPredicted RBP15.56■□□□□ 0.08
DDR1-260ENST00000507533 DSC1Q08554 894 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 COL9A2Q14055 689 aaPredicted RBP15.56■□□□□ 0.08
DDR1-260ENST00000507533 USP41Q3LFD5 358 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 LAIR1Q6GTX8 287 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
DDR1-260ENST00000507533 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
DDR1-260ENST00000507533 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
DDR1-260ENST00000507533 CNNM3Q8NE01 707 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 MBOAT7Q96N66 472 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 RIT2Q99578 217 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 TEKT3Q9BXF9 490 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 GPR62Q9BZJ7 368 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 C6orf50Q9HD87 102 aa15.56■□□□□ 0.08
DDR1-260ENST00000507533 MIA3Q5JRA6 1907 aa15.55■□□□□ 0.08
DDR1-260ENST00000507533 ARL5CA6NH57 179 aa15.55■□□□□ 0.08
DDR1-260ENST00000507533 DDX11L8A8MPP1 907 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms