RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 SRGAP1Q7Z6B7 1085 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 MRPL10Q7Z7H8 261 aaKnown RBP14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 GPR149Q86SP6 731 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 ZNF280BQ86YH2 543 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 C4orf19Q8IY42 314 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 DYDC2Q96IM9 177 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 MINDY3Q9H8M7 445 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 AGPAT5Q9NUQ2 364 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 DNAJB4Q9UDY4 337 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 PCDHB2Q9Y5E7 798 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 IRAK3Q9Y616 596 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 OTOGLQ3ZCN5 2332 aa14.97□□□□□ -0.01
POLR2J3-212ENST00000507355 STK36Q9NRP7 1315 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 CARNS1A5YM72 827 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 DDHD2O94830 711 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 CTDNEP1O95476 244 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 HOXA11P31270 313 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 YWHABP31946 246 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 RFC5P40937 340 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 SLC11A1P49279 550 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 GIT2Q14161 759 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 PTPN14Q15678 1187 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 NCAPH2Q6IBW4 605 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 PSPC1Q8WXF1 523 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 RSAD2Q8WXG1 361 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 NAP1L4Q99733 375 aaKnown RBP14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 LXNQ9BS40 222 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 ORC3Q9UBD5 711 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
POLR2J3-212ENST00000507355 TPRP12270 2363 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 FAM205CA6NFA0 338 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 ASAP2O43150 1006 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 B4GALT3O60512 393 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 ALDH2P05091 517 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 KLRC2P26717 231 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 AFF1P51825 1210 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 CTTNQ14247 550 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 SPECC1Q5M775 1068 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 TCP11Q8WWU5 503 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 VN1R3Q9BXE9 311 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 ZSWIM4Q9H7M6 989 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 RSAD1Q9HA92 442 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 CA14Q9ULX7 337 aa14.95□□□□□ -0.02
POLR2J3-212ENST00000507355 SPTBN2O15020 2390 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 KRBA1A5PL33 1030 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 SLITRK3O94933 977 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 FDPSP14324 419 aaKnown RBP14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 GBP2P32456 591 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 SPIRE1Q08AE8 756 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 NR5A1Q13285 461 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 TPH2Q8IWU9 490 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 RNF149Q8NC42 400 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 FAM193BQ96PV7 902 aaPredicted RBP14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 EMILIN2Q9BXX0 1053 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 TBC1D17Q9HA65 648 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 KANSL3Q9P2N6 904 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 FAN1Q9Y2M0 1017 aa14.94□□□□□ -0.02
POLR2J3-212ENST00000507355 NRP1O14786 923 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 N4BP1O75113 896 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 POMCP01189 267 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 CNPP09543 421 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 MYBP10242 640 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 KRT2P35908 639 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 CLCN4P51793 760 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 AK2P54819 239 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 EMC2Q15006 297 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 WASF1Q92558 559 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 KLHL5Q96PQ7 755 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 MTRQ99707 1265 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 SEMA4AQ9H3S1 761 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 IGSF9Q9P2J2 1179 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 PCDHA12Q9UN75 941 aa14.93□□□□□ -0.02
POLR2J3-212ENST00000507355 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 C2CD2LO14523 706 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 DCNP07585 359 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 ITGA4P13612 1032 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 ANKRD1Q15327 319 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 DCLK2Q8N568 766 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 XPNPEP1Q9NQW7 623 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 MAN1C1Q9NR34 630 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 WNT16Q9UBV4 365 aa14.92□□□□□ -0.02
POLR2J3-212ENST00000507355 GPR179Q6PRD1 2367 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms