RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GYPEP15421 78 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 CRHR1P34998 444 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 CCT2P78371 535 aaKnown RBP3.91□□□□□ -1.78
GYPB-207ENST00000506679 FOXL1Q12952 345 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
GYPB-207ENST00000506679 Q6ZSN1 163 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 Q6ZVL8 140 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 POLNQ7Z5Q5 900 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 ZNF480Q8WV37 535 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 RIN2Q8WYP3 895 aaPredicted RBP3.91□□□□□ -1.78
GYPB-207ENST00000506679 BORCS6Q96GS4 357 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 SLC2A13Q96QE2 648 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 OR14A2Q96R54 314 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 C12orf65Q9H3J6 166 aaKnown RBP3.91□□□□□ -1.78
GYPB-207ENST00000506679 DMRT3Q9NQL9 472 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 TRPS1Q9UHF7 1281 aa3.91□□□□□ -1.78
GYPB-207ENST00000506679 THRAP3Q9Y2W1 955 aaKnown RBP3.91□□□□□ -1.78
GYPB-207ENST00000506679 UBE2QL1A1L167 161 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 PRAMEF4O60810 478 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 ZNF623O75123 536 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 ITGA10O75578 1167 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 ABLIM3O94929 683 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 GASTP01350 101 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 PLP2Q04941 152 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 GRM7Q14831 915 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 SEPT2Q15019 361 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 R3HDM1Q15032 1099 aaKnown RBP3.9□□□□□ -1.79
GYPB-207ENST00000506679 ERICH6BQ5W0A0 696 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 KRT40Q6A162 431 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 MAMDC4Q6UXC1 1216 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 CMTR2Q8IYT2 770 aaKnown RBP3.9□□□□□ -1.79
GYPB-207ENST00000506679 GIMAP8Q8ND71 665 aaPredicted RBP3.9□□□□□ -1.79
GYPB-207ENST00000506679 OR2I1PQ8NGU4 316 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 MPHOSPH9Q99550 1183 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 TCF25Q9BQ70 676 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 C1QTNF3Q9BXJ4 246 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 BCO1Q9HAY6 547 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 GPRC5DQ9NZD1 345 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 SIK3Q9Y2K2 1263 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 MRFAP1Q9Y605 127 aa3.9□□□□□ -1.79
GYPB-207ENST00000506679 XPOTO43592 962 aaKnown RBP3.89□□□□□ -1.79
GYPB-207ENST00000506679 COMTP21964 271 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 EDNRBP24530 442 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
GYPB-207ENST00000506679 SREBF1P36956 1147 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 CASRP41180 1078 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 RECQLP46063 649 aaPredicted RBP3.89□□□□□ -1.79
GYPB-207ENST00000506679 SLC6A9P48067 706 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 EPHB1P54762 984 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 ADKP55263 362 aaKnown RBP3.89□□□□□ -1.79
GYPB-207ENST00000506679 DUSP2Q05923 314 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 MRPL49Q13405 166 aaKnown RBP3.89□□□□□ -1.79
GYPB-207ENST00000506679 CLUL1Q15846 466 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 FAM111BQ6SJ93 734 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 ZBTB46Q86UZ6 589 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 CPA6Q8N4T0 437 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 OR7D4Q8NG98 312 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.89□□□□□ -1.795e-10■□□□□ 9.2
GYPB-207ENST00000506679 EDAQ92838 391 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 CAMKK2Q96RR4 588 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 RCAN3Q9UKA8 241 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 SH3BP1Q9Y3L3 701 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 IPPQ9Y573 584 aa3.89□□□□□ -1.79
GYPB-207ENST00000506679 E2F8A0AVK6 867 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 FAM171A2A8MVW0 826 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 WNT10BO00744 389 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 ADCY6O43306 1168 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 HOXA3O43365 443 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 AKR1B10O60218 316 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 STC2O76061 302 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 ECHS1P30084 290 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 MAGEA10P43363 369 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 GZMKP49863 264 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 SELENOPP49908 381 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 NPEPPSP55786 919 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 PIN1Q13526 163 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 ACAP2Q15057 778 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 CDSNQ15517 529 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 SPATS1Q496A3 300 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 EFCAB2Q5VUJ9 269 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 SPTY2D1Q68D10 685 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 FAM180AQ6UWF9 173 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 HTR3DQ70Z44 454 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 DOK3Q7L591 496 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 ZNF572Q7Z3I7 529 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 PNMA8AQ86V59 439 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 TRMT2AQ8IZ69 625 aaKnown RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 THEMISQ8N1K5 641 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.88□□□□□ -1.79
GYPB-207ENST00000506679 NRG4Q8WWG1 115 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 COA7Q96BR5 231 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 HOOK2Q96ED9 719 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 IL17RAQ96F46 866 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 LOXL4Q96JB6 756 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 ZNF512Q96ME7 567 aaPredicted RBP3.88□□□□□ -1.79
GYPB-207ENST00000506679 CEP89Q96ST8 783 aa3.88□□□□□ -1.79
GYPB-207ENST00000506679 PDCD2LQ9BRP1 358 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms