RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 BHMT2Q9H2M3 363 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 UBAP1Q9NZ09 502 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 KAT6AQ92794 2004 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEB3A0JP26 581 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 POTECB2RU33 542 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TRAPPC3O43617 180 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 FERP16591 822 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 RPL13P26373 211 aaKnown RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MSX2P35548 267 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 GALK1P51570 392 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CCR3P51677 355 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 GALCP54803 685 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ZCWPW2Q504Y3 356 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 PAPD7Q5XG87 772 aaKnown RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEBQ6S5H4 581 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SIX5Q8N196 739 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MMGT1Q8N4V1 131 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CFAP36Q96G28 342 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 CAMKK2Q96RR4 588 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 H7C1W4 665 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SRGNP10124 158 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 RXRBP28702 533 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 BYSLQ13895 437 aaKnown RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TAF1BQ53T94 588 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 DAB2IPQ5VWQ8 1189 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 LLGL2Q6P1M3 1020 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SCYL2Q6P3W7 929 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 ANO5Q75V66 913 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SMC1BQ8NDV3 1235 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MAP3K14Q99558 947 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 THAP9Q9H5L6 903 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 COMMD10Q9Y6G5 202 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 MED23Q9ULK4 1368 aa8.33□□□□□ -1.08
ATP2C1-208ENST00000504948 SYNJ2BP-COX16A0A087WUM0 186 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEFA5A3E0 1075 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 RNF8O76064 485 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 S100BP04271 92 aaPredicted RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEIP0CG38 1075 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 LONP1P36776 959 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 GCLMP48507 274 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 RPS6KA3P51812 740 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ITGB3BPQ13352 177 aaPredicted RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PPP6R3Q5H9R7 873 aaPredicted RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEGQ6S5H5 508 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CLEC4GQ6UXB4 293 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 RSPH3Q86UC2 560 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 JAMLQ86YT9 394 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SCG3Q8WXD2 468 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 FAXDC2Q96IV6 333 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ACP6Q9NPH0 428 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 COX16Q9P0S2 106 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 AGAP1Q9UPQ3 857 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CALCAP01258 141 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 AKR1B1P15121 316 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 TMED10P49755 219 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ARFIP2P53365 341 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 MRPS35P82673 323 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 AMPD2Q01433 879 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 KIAA1755Q5JYT7 1200 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SRBD1Q8N5C6 995 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SGIP1Q9BQI5 828 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 RNF26Q9BY78 433 aaPredicted RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PHACTR1Q9C0D0 580 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 NEUROG2Q9H2A3 272 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 V9GYQ6 96 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 NEMP1O14524 444 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PDE5AO76074 875 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 FTLP02792 175 aaPredicted RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CD58P19256 250 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CASP2P42575 452 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PTDSS1P48651 473 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CTTNQ14247 550 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 KPNB1Q14974 876 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SEPT2Q15019 361 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ICA1LQ8NDH6 482 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 LARSQ9P2J5 1176 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 DNM3Q9UQ16 869 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 NKRFO15226 690 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 CSDE1O75534 798 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 MT-ND3P03897 115 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 HSPA9P38646 679 aaKnown RBP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 KRT17Q04695 432 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ASPHQ12797 758 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 SPARCL1Q14515 664 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 WDR78Q5VTH9 848 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 USP6NLQ92738 828 aa8.32□□□□□ -1.08
ATP2C1-208ENST00000504948 ZMAT2Q96NC0 199 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms