RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ELMO3Q96BJ8 720 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 CDCA5Q96FF9 252 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 TIPINQ9BVW5 301 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 STK33Q9BYT3 514 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 SMARCAL1Q9NZC9 954 aa15.11■□□□□ 0.01
TCOF1-207ENST00000504761 PSMA2P25787 234 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 RARRES1P49788 294 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 MTMR3Q13615 1198 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 ARHGEF6Q15052 776 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 PPP6R3Q5H9R7 873 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 MFSD14CQ5VZR4 134 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 MAP7D3Q8IWC1 876 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 AGPAT1Q99943 283 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 RANBP17Q9H2T7 1088 aaKnown RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 LRFN2Q9ULH4 789 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 IGSF9BQ9UPX0 1349 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 PEX10O60683 326 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 RARBP10826 455 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 NLRP11P59045 1033 aaKnown RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 NCOA4Q13772 614 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 GNASQ5JWF2 1037 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 KLHDC7AQ5VTJ3 777 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 DNAAF5Q86Y56 855 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 PRPF31Q8WWY3 499 aaKnown RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 NSRP1Q9H0G5 558 aaKnown RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 MKRN1Q9UHC7 482 aaKnown RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 PALM2Q8IXS6 379 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 KCTD6Q8NC69 237 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 GRK7Q8WTQ7 553 aa15.1■□□□□ 0.01
TCOF1-207ENST00000504761 GPBP1L1Q9HC44 474 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-207ENST00000504761 ADAMTS3O15072 1205 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 SUPT20HL2P0C7V6 817 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 CPA5Q8WXQ8 436 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 CLMNQ96JQ2 1002 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 GTF2A2P52657 109 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 DHX9Q08211 1270 aaKnown RBP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 CCDC117Q8IWD4 279 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 CCNYQ8ND76 341 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 HSPH1Q92598 858 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 MS4A14Q96JA4 679 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 DUSP9Q99956 384 aaKnown RBP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 RNF14Q9UBS8 474 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 PPP2R3BQ9Y5P8 575 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 RNF10Q8N5U6 811 aaKnown RBP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 SNX24Q9Y343 169 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 ZRANB2O95218 330 aaKnown RBP eCLIP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 ECEL1O95672 775 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 HLA-DRAP01903 254 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 METTL23Q86XA0 190 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 SIX6OS1Q8N1H7 587 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 TNFRSF25Q93038 417 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 ACAP3Q96P50 834 aa15.09■□□□□ 0.01
TCOF1-207ENST00000504761 MAGED2Q9UNF1 606 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-207ENST00000504761 ANO9A1A5B4 782 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 M0QYV0 167 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 PDHXO00330 501 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 ATMINO43313 823 aaPredicted RBP15.08■□□□□ 0.01
TCOF1-207ENST00000504761 PRPSAP2O60256 369 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 HBP1O60381 514 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 MAD1L1Q9Y6D9 718 aa15.08■□□□□ 0.01
TCOF1-207ENST00000504761 UBE4BO95155 1302 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 ZNF541Q9H0D2 1346 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 A0A087X0T9 212 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 HUS1O60921 280 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 FAM228BP0C875 321 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 CYP2C9P11712 490 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0
TCOF1-207ENST00000504761 SLCO1A2P46721 670 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 KIAA1841Q6NSI8 718 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 BEST2Q8NFU1 509 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 PLAGL2Q9UPG8 496 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 SNX9Q9Y5X1 595 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 SLC26A4O43511 780 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 KLRC1P26715 233 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 MMP14P50281 582 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 DR1Q01658 176 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
TCOF1-207ENST00000504761 CCDC14Q49A88 953 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 TMEM119Q4V9L6 283 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 ATF7IP2Q5U623 682 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 AFG1LQ8WV93 481 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 TRAPPC12Q8WVT3 735 aa15.08■□□□□ 0
TCOF1-207ENST00000504761 SSU72P8A0A1W2PR75 194 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 EGFRP00533 1210 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 PSMC1P62191 440 aaKnown RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 MKNK1Q9BUB5 465 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 ZFYVE28Q9HCC9 887 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 MRFAP1Q9Y605 127 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
TCOF1-207ENST00000504761 TISP43B9A030 160 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 ITGB5P18084 799 aa15.07■□□□□ 0
TCOF1-207ENST00000504761 CASP5P51878 434 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms