RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 EPN3Q9H201 632 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ZNF180Q9UJW8 692 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ATP6V1DQ9Y5K8 247 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 IKBKGQ9Y6K9 419 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 CASP8AP2Q9UKL3 1982 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 NFIBO00712 420 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SPTLC2O15270 562 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 LGR5O75473 907 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 HNRNPCP07910 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SFPQP23246 707 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SCTRP47872 440 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 TUBA1BP68363 451 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 STIM1Q13586 685 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 NPY5RQ15761 445 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 TUBA1AQ71U36 451 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 GPR142Q7Z601 462 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 LMNTD2Q8IXW0 634 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 DAGLBQ8NCG7 672 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 MAELQ96JY0 434 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SMC6Q96SB8 1091 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 CCT7Q99832 543 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 SLC4A7Q9Y6M7 1214 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 LRRC37A2A6NM11 1700 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 PIK3CDO00329 1044 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 STRNO43815 780 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 ALADP13716 330 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 HSD17B4P51659 736 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 KIF11P52732 1056 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 NAPAP54920 295 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 MTTPP55157 894 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 CAP1Q01518 475 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 GRB14Q14449 540 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 P3H1Q32P28 736 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 KAZNQ674X7 775 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 MCF2L2Q86YR7 1114 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 CKAP2LQ8IYA6 745 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 TRPC4APQ8TEL6 797 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 ZNF296Q8WUU4 475 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 NCSTNQ92542 709 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 NAF1Q96HR8 494 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 BHMT2Q9H2M3 363 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 RIC8AQ9NPQ8 531 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 ABCF3Q9NUQ8 709 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 PLXNA1Q9UIW2 1896 aa10.35□□□□□ -0.75
PDLIM5-207ENST00000503974 DNAJC25-GNG10A0A024R161 153 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SRRM3A6NNA2 597 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 TTC34A8MYJ7 566 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 MEIS2O14770 477 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 PFASO15067 1338 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 BIRC5O15392 142 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 FKTNO75072 461 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CYP1A2P05177 515 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 RPL17P18621 184 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 PTPREP23469 700 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SH3BGRP55822 239 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 GNG11P61952 73 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CAMK4Q16566 473 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CCDC153Q494R4 210 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 MORN1Q5T089 497 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 ALS2CLQ60I27 953 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 PLEKHH3Q7Z736 793 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 C11orf96Q7Z7L8 435 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 DAAM2Q86T65 1068 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 USP6NLQ92738 828 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 AZIN2Q96A70 460 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 GLT8D2Q9H1C3 349 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CLK4Q9HAZ1 481 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 HOMER2Q9NSB8 354 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CYP39A1Q9NYL5 469 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CFAP45Q9UL16 551 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 DOCK3Q8IZD9 2030 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 FRMPD4Q14CM0 1322 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 GOLGA6L10A0A0M3HER8 536 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 M0R2N6 131 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 GHRP10912 638 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SP100P23497 879 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 PDE6CP51160 858 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 FCGRTP55899 365 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SUZ12Q15022 739 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CMPK2Q5EBM0 449 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 DUS1LQ6P1R4 473 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CCBE1Q6UXH8 406 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 CABP7Q86V35 215 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 AGAP11Q8TF27 550 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 COG1Q8WTW3 980 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 GJD2Q9UKL4 321 aa10.34□□□□□ -0.75
PDLIM5-207ENST00000503974 LINC00854A0A1B0GVQ3 168 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms