RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SEPT9Q9UHD8 586 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-210ENST00000503827 MTF2Q9Y483 593 aaPredicted RBP17.78■□□□□ 0.44
PDLIM7-210ENST00000503827 NCAM2O15394 837 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 TGM5O43548 720 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 SFNP31947 248 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 PFKPQ01813 784 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 PPM1JQ5JR12 505 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 NELL1Q92832 810 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 NLRP4Q96MN2 994 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 NIFKQ9BYG3 293 aaKnown RBP17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 PARD6AQ9NPB6 346 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 LTB4R2Q9NPC1 389 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 AGPAT5Q9NUQ2 364 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 CDH7Q9ULB5 785 aa17.77■□□□□ 0.44
PDLIM7-210ENST00000503827 ZFHX4Q86UP3 3567 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 IGKV6-21A0A0C4DH24 114 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 NR1I2O75469 434 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 JAK3P52333 1124 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 RTN1Q16799 776 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 NELL2Q99435 816 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 FAM126AQ9BYI3 521 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 RAB23Q9ULC3 237 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 RALGAPA1Q6GYQ0 2036 aa17.76■□□□□ 0.43
PDLIM7-210ENST00000503827 CHMP2AO43633 222 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 ZMYND10O75800 440 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 EFEMP2O95967 443 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 CIITAP33076 1130 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 FUT2Q10981 343 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 COL9A3Q14050 684 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 XKR3Q5GH77 459 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 LILRA6Q6PI73 481 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 APOA5Q6Q788 366 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 TSSK4Q6SA08 328 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 GRASPQ7Z6J2 395 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 KSR1Q8IVT5 923 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 CNNM3Q8NE01 707 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 NETO1Q8TDF5 533 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
PDLIM7-210ENST00000503827 CHD8Q9HCK8 2581 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 SLC30A4O14863 429 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 GAS7O60861 476 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 CD72P21854 359 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 CREMQ03060 361 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 SPEM2Q0P670 501 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 REXO1Q8N1G1 1221 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 CLDN23Q96B33 292 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 RIT2Q99578 217 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 JPH2Q9BR39 696 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 SH2D3AQ9BRG2 576 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 TEKT3Q9BXF9 490 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 C6orf50Q9HD87 102 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 USP24Q9UPU5 2620 aa17.74■□□□□ 0.43
PDLIM7-210ENST00000503827 CHD6Q8TD26 2715 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 ESYT2A0FGR8 921 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 MSH4O15457 936 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 ZBTB43O43298 467 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 MAFO75444 373 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 ITGA4P13612 1032 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 RPS9P46781 194 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 GPR65Q8IYL9 337 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 RDM1Q8NG50 284 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 LENG9Q96B70 501 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 PHF20Q9BVI0 1012 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 ZMYND12Q9H0C1 365 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 PRMT8Q9NR22 394 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-210ENST00000503827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 TMEM150BA6NC51 233 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 TARSP26639 723 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 NRLP54845 237 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 DSC1Q08554 894 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 PFKFB3Q16875 520 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 UBXN11Q5T124 520 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 LRCH2Q5VUJ6 765 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 LAIR1Q6GTX8 287 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 TPRG1Q6ZUI0 275 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 SRGAP1Q7Z6B7 1085 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 CCDC12Q8WUD4 166 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 FGF13Q92913 245 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 B3GALT6Q96L58 329 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 MBOAT7Q96N66 472 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 MRPS17Q9Y2R5 130 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 CFAP47Q6ZTR5 3102 aa17.72■□□□□ 0.43
PDLIM7-210ENST00000503827 DDX11L8A8MPP1 907 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 SLC27A2O14975 620 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms