RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ITGA4P13612 1032 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 KLRC2P26717 231 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 TXKP42681 527 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 MTHFRP42898 656 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 SLC11A1P49279 550 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 NEK4P51957 841 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 ITIH3Q06033 890 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 GIT2Q14161 759 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 TFDP1Q14186 410 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 DDX53Q86TM3 631 aaKnown RBP11.95□□□□□ -0.5
SNCA-207ENST00000502987 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 TMEM173Q86WV6 379 aaPredicted RBP11.95□□□□□ -0.5
SNCA-207ENST00000502987 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 C12orf76Q8N812 135 aaPredicted RBP11.95□□□□□ -0.5
SNCA-207ENST00000502987 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
SNCA-207ENST00000502987 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 KCNH6Q9H252 994 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 MINDY3Q9H8M7 445 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 CDH22Q9UJ99 828 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 DBR1Q9UK59 544 aaKnown RBP11.95□□□□□ -0.5
SNCA-207ENST00000502987 TECTAO75443 2155 aa11.95□□□□□ -0.5
SNCA-207ENST00000502987 CNTNAP2Q9UHC6 1331 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 INO80B-WBP1J3KQ70 363 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 SLITRK3O94933 977 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 CTSAP10619 480 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 EPCAMP16422 314 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 SIGLEC14Q08ET2 396 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 MXD4Q14582 209 aaPredicted RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 ME3Q16798 604 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 PTPN21Q16825 1174 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 AGMOQ6ZNB7 445 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 BMP8AQ7Z5Y6 402 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 MRPL10Q7Z7H8 261 aaKnown RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 CABP7Q86V35 215 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 NECTIN4Q96NY8 510 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 APOL6Q9BWW8 343 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 EMILIN2Q9BXX0 1053 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 TTC12Q9H892 705 aaPredicted RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 UBN1Q9NPG3 1134 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
SNCA-207ENST00000502987 TDRD15B5MCY1 1934 aaKnown RBP11.94□□□□□ -0.5
SNCA-207ENST00000502987 BTBD18B2RXH4 712 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 C2CD2LO14523 706 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 NRP1O14786 923 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 NEMFO60524 1076 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 NR1I2O75469 434 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 DDHD2O94830 711 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 LARGE1O95461 756 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 FDPSP14324 419 aaKnown RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 OR1G1P47890 313 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 NHLH1Q02575 133 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNCA-207ENST00000502987 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 TMC5Q6UXY8 1006 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 PPFIBP1Q86W92 1011 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 DIS3L2Q8IYB7 885 aaKnown RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 FBXL6Q8N531 539 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 KREMEN2Q8NCW0 462 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 BCL7CQ8WUZ0 217 aaPredicted RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 GTF3C6Q969F1 213 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 POMKQ9H5K3 350 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 MRPL17Q9NRX2 175 aaKnown RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 STK39Q9UEW8 545 aa11.93□□□□□ -0.5
SNCA-207ENST00000502987 PRG3Q9Y2Y8 225 aaPredicted RBP11.93□□□□□ -0.5
SNCA-207ENST00000502987 A0A087WWV3 80 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 C2CD4DB7Z1M9 353 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 JAK2O60674 1132 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 DGAT1O75907 488 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
SNCA-207ENST00000502987 AXLP30530 894 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 MRE11P49959 708 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 AFF1P51825 1210 aaKnown RBP11.92□□□□□ -0.5
SNCA-207ENST00000502987 PTENP60484 403 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 FOXK1P85037 733 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 GUCY1B3Q02153 619 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 SPIRE1Q08AE8 756 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 UBXN11Q5T124 520 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
SNCA-207ENST00000502987 PIGOQ8TEQ8 1089 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 TMEM175Q9BSA9 504 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
SNCA-207ENST00000502987 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
SNCA-207ENST00000502987 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms