RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 RNF169Q8NCN4 708 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 SMG8Q8ND04 991 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 BCL7CQ8WUZ0 217 aaPredicted RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 ATOH1Q92858 354 aaPredicted RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 LPPQ93052 612 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 CEP170P1Q96L14 293 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NLRP4Q96MN2 994 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 FAM193BQ96PV7 902 aaPredicted RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 MTRQ99707 1265 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 LXNQ9BS40 222 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 CSRNP2Q9H175 543 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 NCOA5Q9HCD5 579 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 WDR6Q9NNW5 1121 aaKnown RBP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 ZDHHC7Q9NXF8 308 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 DNAJB4Q9UDY4 337 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 MYO15AQ9UKN7 3530 aa6.81□□□□□ -1.32
LSM3P4-201ENST00000502948 A0A1B0GUA9 196 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 TMEM150BA6NC51 233 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ARL5CA6NH57 179 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 B4GALT3O60512 393 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 CCNT1O60563 726 aaKnown RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 TSPAN1O60635 241 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ERLIN2O94905 339 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 URODP06132 367 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ITGA4P13612 1032 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 NPR3P17342 541 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 MUTP22033 750 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 KLRC2P26717 231 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ARL2P36404 184 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 GLUD2P49448 558 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 NPEPPSP55786 919 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 SCRN1Q12765 414 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 GRIK3Q13003 919 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ORC2Q13416 577 aaPredicted RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ANKRD1Q15327 319 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 FAM187BQ17R55 369 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 CWF19L1Q69YN2 538 aaKnown RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 PDXDC1Q6P996 788 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 LILRA6Q6PI73 481 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 CCDC105Q8IYK2 499 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 RNF149Q8NC42 400 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 GSTCDQ8NEC7 633 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 TNFRSF25Q93038 417 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 GJA10Q969M2 543 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 ZNF668Q96K58 619 aaPredicted RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 SNX27Q96L92 541 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 COLEC11Q9BWP8 271 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 MINDY3Q9H8M7 445 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 KCNK12Q9HB15 430 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 XPNPEP1Q9NQW7 623 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 MARCH5Q9NX47 278 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 WRAP73Q9P2S5 460 aaPredicted RBP6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 LIMD1Q9UGP4 676 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 PCDHA12Q9UN75 941 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 IPPQ9Y573 584 aa6.8□□□□□ -1.32
LSM3P4-201ENST00000502948 PRR23AA6NEV1 266 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 H0Y858 1186 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 TEX28O15482 410 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 GLUD1P00367 558 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 PDGFBP01127 241 aaPredicted RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 SRGAP2CP0DJJ0 459 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 HOXA9P31269 272 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 RBM25P49756 843 aaKnown RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 MBTD1Q05BQ5 628 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 AMHR2Q16671 573 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 USP41Q3LFD5 358 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 XKR9Q5GH70 373 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 PLA2G4FQ68DD2 849 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 CDCA2Q69YH5 1023 aaPredicted RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 PHLDB3Q6NSJ2 640 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 SLC27A1Q6PCB7 646 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 ERMP1Q7Z2K6 904 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 C12orf76Q8N812 135 aaPredicted RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 ZNF579Q8NAF0 562 aaKnown RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 AUTS2Q8WXX7 1259 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 NKD2Q969F2 451 aaPredicted RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 TMEM143Q96AN5 459 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 SH2D3AQ9BRG2 576 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 APOL5Q9BWW9 433 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 SLKQ9H2G2 1235 aaPredicted RBP6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 MFSD1Q9H3U5 465 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 BRMS1Q9HCU9 246 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 MAN1C1Q9NR34 630 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 SLC2A4RGQ9NR83 387 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 TSHZ2Q9NRE2 1034 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 PDRG1Q9NUG6 133 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 CDH22Q9UJ99 828 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 INPP5FQ9Y2H2 1132 aa6.79□□□□□ -1.32
LSM3P4-201ENST00000502948 CLUHO75153 1309 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 VWA8A3KMH1 1905 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 MIA3Q5JRA6 1907 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 MYH15Q9Y2K3 1946 aa6.78□□□□□ -1.32
LSM3P4-201ENST00000502948 CCDC195A0A1B0GUA6 201 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms