RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GLUD2P49448 558 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 EVCP57679 992 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 PPP2R5CQ13362 524 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 INF2Q27J81 1249 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 KIAA0319Q5VV43 1072 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 SPATA31D4Q6ZUB0 917 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 SLC44A3Q8N4M1 653 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 SMG7Q92540 1137 aaKnown RBP16.43■□□□□ 0.22
TRAF4-212ENST00000498540 ZNF707Q96C28 371 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-212ENST00000498540 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 EIF2AQ9BY44 585 aaKnown RBP16.43■□□□□ 0.22
TRAF4-212ENST00000498540 RHOBTB2Q9BYZ6 727 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 IPPQ9Y573 584 aa16.43■□□□□ 0.22
TRAF4-212ENST00000498540 ARL5CA6NH57 179 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 ITGA4P13612 1032 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 MLH1P40692 756 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 DSC1Q08554 894 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
TRAF4-212ENST00000498540 NONOQ15233 471 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■□□□ 12.9
TRAF4-212ENST00000498540 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 RNF149Q8NC42 400 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 RIN2Q8WYP3 895 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-212ENST00000498540 STAMQ92783 540 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 B3GALT6Q96L58 329 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 ZFP42Q96MM3 310 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 GAD1Q99259 594 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 RXFP1Q9HBX9 757 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 MIOSQ9NXC5 875 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 SSX2IPQ9Y2D8 614 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 HES2Q9Y543 173 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 R4GN57 208 aa16.42■□□□□ 0.22
TRAF4-212ENST00000498540 FANCMQ8IYD8 2048 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 SRFP11831 508 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 RFX1P22670 979 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 RFC5P40937 340 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 SCNN1GP51170 649 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 DSG1Q02413 1049 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 TOB2Q14106 344 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-212ENST00000498540 EMC2Q15006 297 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 KCNG4Q8TDN1 519 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 LXNQ9BS40 222 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 SLKQ9H2G2 1235 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-212ENST00000498540 KCNMB3Q9NPA1 279 aa16.41■□□□□ 0.22
TRAF4-212ENST00000498540 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 FRYLO94915 3013 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 TSPAN1O60635 241 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 ERLIN2O94905 339 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 DEXIO95424 95 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 PAPLNO95428 1278 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 LMNAP02545 664 aaKnown RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 P4HBP07237 508 aaKnown RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 DCNP07585 359 aaKnown RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 YWHABP31946 246 aaKnown RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 SPECC1Q5M775 1068 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 ELMSAN1Q6PJG2 1045 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 GET4Q7L5D6 327 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 KRT25Q7Z3Z0 450 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-212ENST00000498540 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 DPP7Q9UHL4 492 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 PPME1Q9Y570 386 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 MYH15Q9Y2K3 1946 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 COL4A3Q01955 1670 aa16.4■□□□□ 0.22
TRAF4-212ENST00000498540 ZBTB39O15060 712 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 TGM5O43548 720 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 DKC1O60832 514 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRAF4-212ENST00000498540 NOTUMQ6P988 496 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 TCP11Q8WWU5 503 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 HAS1Q92839 578 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 RMDN1Q96DB5 314 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 FAM20AQ96MK3 541 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
TRAF4-212ENST00000498540 APOL6Q9BWW8 343 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 GPR62Q9BZJ7 368 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 NT5C3AQ9H0P0 336 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 NXF3Q9H4D5 531 aaKnown RBP16.39■□□□□ 0.21
TRAF4-212ENST00000498540 PIDD1Q9HB75 910 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 XPNPEP1Q9NQW7 623 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 RGL1Q9NZL6 768 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 DLGAP2Q9P1A6 1054 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 KCNJ14Q9UNX9 436 aa16.39■□□□□ 0.21
TRAF4-212ENST00000498540 ANHXE9PGG2 379 aa16.38■□□□□ 0.21
TRAF4-212ENST00000498540 CPLX1O14810 134 aa16.38■□□□□ 0.21
TRAF4-212ENST00000498540 ASAP2O43150 1006 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms