RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 NRP1O14786 923 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 ST18O60284 1047 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 PDGFBP01127 241 aaPredicted RBP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 POMCP01189 267 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 CNPP09543 421 aaKnown RBP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 NCLP19338 710 aaKnown RBP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 AXLP30530 894 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 TFDP1Q14186 410 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 EMC2Q15006 297 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 GPR149Q86SP6 731 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 DYDC2Q96IM9 177 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 MTRQ99707 1265 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 BRMS1Q9HCU9 246 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 WRAP73Q9P2S5 460 aaPredicted RBP13.41□□□□□ -0.26
CNOT4-211ENST00000498534 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 PCDHA12Q9UN75 941 aa13.41□□□□□ -0.26
CNOT4-211ENST00000498534 PFKFB2O60825 505 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 SLITRK3O94933 977 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 ASGR2P07307 311 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 OR1G1P47890 313 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CLCN4P51793 760 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 AK2P54819 239 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CYP4A11Q02928 519 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CTTNQ14247 550 aaKnown RBP13.4□□□□□ -0.26
CNOT4-211ENST00000498534 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 NOTUMQ6P988 496 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 HACE1Q8IYU2 909 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
CNOT4-211ENST00000498534 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 ORC3Q9UBD5 711 aaPredicted RBP13.4□□□□□ -0.26
CNOT4-211ENST00000498534 CACNA1HO95180 2353 aa13.4□□□□□ -0.26
CNOT4-211ENST00000498534 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 H0Y858 1186 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 C2CD2LO14523 706 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 ZBTB39O15060 712 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 LILRB3O75022 631 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 SOD2P04179 222 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 URODP06132 367 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 ADH1AP07327 375 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 KRT2P35908 639 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
CNOT4-211ENST00000498534 PTENP60484 403 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 RPS6KC1Q96S38 1066 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 EIF2AK1Q9BQI3 630 aaKnown RBP13.39□□□□□ -0.27
CNOT4-211ENST00000498534 COLEC11Q9BWP8 271 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
CNOT4-211ENST00000498534 ANKEF1Q9NU02 776 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 FAM86C1Q9NVL1 165 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
CNOT4-211ENST00000498534 IPPQ9Y573 584 aa13.39□□□□□ -0.27
CNOT4-211ENST00000498534 B4GALT3O60512 393 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 GFRA3O60609 400 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 DGAT1O75907 488 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 CLCN5P51795 746 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 TDGQ13569 410 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 CALCRLQ16602 461 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 CYP26C1Q6V0L0 522 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
CNOT4-211ENST00000498534 GAD1Q99259 594 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
CNOT4-211ENST00000498534 CCDC195A0A1B0GUA6 201 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 TSPAN1O60635 241 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 LYPLA2O95372 231 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNOT4-211ENST00000498534 GLUD2P49448 558 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 ANAPC15P60006 121 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 SPIRE1Q08AE8 756 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 NR5A1Q13285 461 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 TRIM29Q14134 588 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 CMASQ8NFW8 434 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-211ENST00000498534 STAMQ92783 540 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
CNOT4-211ENST00000498534 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 TTC12Q9H892 705 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-211ENST00000498534 MAN1C1Q9NR34 630 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 IGSF9Q9P2J2 1179 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 GIT1Q9Y2X7 761 aa13.37□□□□□ -0.27
CNOT4-211ENST00000498534 USP34Q70CQ2 3546 aa13.36□□□□□ -0.27
CNOT4-211ENST00000498534 TTLL13PA6NNM8 815 aa13.36□□□□□ -0.27
CNOT4-211ENST00000498534 INPPL1O15357 1258 aa13.36□□□□□ -0.27
CNOT4-211ENST00000498534 TEX28O15482 410 aa13.36□□□□□ -0.27
CNOT4-211ENST00000498534 DTNBO60941 627 aa13.36□□□□□ -0.27
CNOT4-211ENST00000498534 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms