RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 USP49Q70CQ1 688 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 MRPL10Q7Z7H8 261 aaKnown RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 GPBP1Q86WP2 473 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 HACE1Q8IYU2 909 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 SPIRE2Q8WWL2 714 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 MRPL9Q9BYD2 267 aaKnown RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 CCDC113Q9H0I3 377 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 TMEM134Q9H6X4 195 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 CERS4Q9HA82 394 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 UBN1Q9NPG3 1134 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 AAASQ9NRG9 546 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
HLA-B-254ENST00000497377 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
HLA-B-254ENST00000497377 A0A1B0GUA9 196 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 CCDC169A6NNP5 214 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 K7ERI5 159 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 N4BP3O15049 544 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 PRKCBP05771 671 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 LINC00271P0C7V0 271 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 ABCD1P33897 745 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 CTNNB1P35222 781 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 STAT6P42226 847 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 NPTX2P47972 431 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 ME1P48163 572 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 KRT85P78386 507 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 PRPF4BQ13523 1007 aaKnown RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 MCM6Q14566 821 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 PAN2Q504Q3 1202 aaKnown RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 UBXN11Q5T124 520 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 SLC27A1Q6PCB7 646 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 GLB1LQ6UWU2 654 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 P2RX5Q93086 422 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 CASD1Q96PB1 797 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 C17orf80Q9BSJ5 609 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 CUEDC2Q9H467 287 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 KMT5AQ9NQR1 393 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 ARHGAP28Q9P2N2 729 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 MRPL42Q9Y6G3 142 aaKnown RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 COL4A4P53420 1690 aaPredicted RBP12.63□□□□□ -0.39
HLA-B-254ENST00000497377 COL6A3P12111 3177 aa12.63□□□□□ -0.39
HLA-B-254ENST00000497377 ZMYM2Q9UBW7 1377 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 EPOPA6NHQ4 379 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 H3BNC9 293 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 TBCAO75347 108 aaKnown RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 FAM13AO94988 1023 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 KRT18P05783 430 aaKnown RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 LAG3P18627 525 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 IGFBP4P22692 258 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 GATMP50440 423 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 ZNF131P52739 623 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 ADGRE1Q14246 886 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 DHX8Q14562 1220 aaKnown RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 PTPROQ16827 1216 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 CLLU1OSQ5K130 101 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 SLC17A8Q8NDX2 589 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 KCNN1Q92952 543 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 REEP2Q9BRK0 252 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 PYM1Q9BRP8 204 aaKnown RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 ADPGKQ9BRR6 497 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
HLA-B-254ENST00000497377 LMAN2LQ9H0V9 348 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 MTUS1Q9ULD2 1270 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 PCDHB12Q9Y5F1 795 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
HLA-B-254ENST00000497377 SFI1A8K8P3 1242 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 B4GALT5O43286 388 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 LPXNO60711 386 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 ITGA4P13612 1032 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 RAD51AP2Q09MP3 1159 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 STRN3Q13033 797 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 GPM6BQ13491 265 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 GIT2Q14161 759 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 DCAF4L1Q3SXM0 396 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 NOMO2Q5JPE7 1267 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
HLA-B-254ENST00000497377 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
HLA-B-254ENST00000497377 SPRED2Q7Z698 418 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 URGCPQ8TCY9 931 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
HLA-B-254ENST00000497377 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms