RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ADAM15Q13444 863 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 CYB5RLQ6IPT4 315 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 ATG14Q6ZNE5 492 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 OVCH2Q7RTZ1 564 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 PIK3C3Q8NEB9 887 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 OR2I1PQ8NGU4 316 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 YTHDC1Q96MU7 727 aaKnown RBP6.88□□□□□ -1.31
SSR3-208ENST00000496050 CGRRF1Q99675 332 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 EPB41L4AQ9HCS5 686 aaPredicted RBP6.88□□□□□ -1.31
SSR3-208ENST00000496050 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.88□□□□□ -1.31
SSR3-208ENST00000496050 FAM184BQ9ULE4 1060 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 PCDHB1Q9Y5F3 818 aa6.88□□□□□ -1.31
SSR3-208ENST00000496050 TCAF2A6NFQ2 919 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 RFXAPO00287 272 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 TPP1O14773 563 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 B3GALT2O43825 422 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 FARP2O94887 1054 aaPredicted RBP6.87□□□□□ -1.31
SSR3-208ENST00000496050 GASTP01350 101 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 RHCEP18577 417 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 HTR1BP28222 390 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 KIR2DL3P43628 341 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 MRE11P49959 708 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 WNT3AP56704 352 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 RHDQ02161 417 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 SEPT2Q15019 361 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 CCDC149Q6ZUS6 474 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 LARP4Q71RC2 724 aaKnown RBP eCLIP6.87□□□□□ -1.31
SSR3-208ENST00000496050 DAAM2Q86T65 1068 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
SSR3-208ENST00000496050 KAT5Q92993 513 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 CDK5RAP3Q96JB5 506 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 C14orf93Q9H972 538 aaKnown RBP6.87□□□□□ -1.31
SSR3-208ENST00000496050 BCO1Q9HAY6 547 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 TDP1Q9NUW8 608 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 FAM50BQ9Y247 325 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 ZDHHC9Q9Y397 364 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 KCTD3Q9Y597 815 aa6.87□□□□□ -1.31
SSR3-208ENST00000496050 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 C2orf78A6NCI8 922 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 FAM227AF5H4B4 570 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 ALDH1A2O94788 518 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 ARIH2O95376 493 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 IFIT2P09913 472 aaKnown RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 PI3P19957 117 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 CACNB3P54284 484 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 FAM193AP78312 1265 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 CDC42EP1Q00587 391 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 MESP2Q0VG99 397 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 USP10Q14694 798 aaKnown RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 SSPNQ14714 243 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 MCTP2Q6DN12 878 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 IL31Q6EBC2 164 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 DARS2Q6PI48 645 aaKnown RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 NPNTQ6UXI9 565 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 RSPH3Q86UC2 560 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 KIAA0319LQ8IZA0 1049 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 KLHL36Q8N4N3 616 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 C3orf20Q8ND61 904 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 KLHDC4Q8TBB5 520 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 CLPTM1LQ96KA5 538 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 MPHOSPH6Q99547 160 aaKnown RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 OR10A2Q9H208 303 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 CHST12Q9NRB3 414 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 L1RE1Q9UN81 338 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 SMG5Q9UPR3 1016 aaKnown RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 CTDP1Q9Y5B0 961 aaPredicted RBP6.86□□□□□ -1.31
SSR3-208ENST00000496050 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
SSR3-208ENST00000496050 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 APAF1O14727 1248 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 FTLP02792 175 aaPredicted RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 AGFG1P52594 562 aaKnown RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 DLX2Q07687 328 aaPredicted RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 GALEQ14376 348 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 KIAA0753Q2KHM9 967 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 MST1LQ2TV78 715 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 ZMAT1Q5H9K5 638 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 Q6ZVL8 140 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 PQLC1Q8N2U9 271 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 TXNDC5Q8NBS9 432 aaKnown RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 FAM156AQ8NDB6 213 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 OR7D4Q8NG98 312 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 NSUN6Q8TEA1 469 aaKnown RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 ZNF480Q8WV37 535 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 HOXB13Q92826 284 aaPredicted RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 RGMAQ96B86 450 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 SLC7A6OSQ96CW6 309 aaPredicted RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 UHRF1Q96T88 793 aaPredicted RBP6.85□□□□□ -1.31
SSR3-208ENST00000496050 SLC38A3Q99624 504 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 TLR9Q9NR96 1032 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 ING3Q9NXR8 418 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 ADAM29Q9UKF5 820 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 STXBP5LQ9Y2K9 1186 aa6.85□□□□□ -1.31
SSR3-208ENST00000496050 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms