RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 VN1R3Q9BXE9 311 aa18.81■□□□□ 0.6
APOBEC3A-204ENST00000495988 TRIM6Q9C030 488 aaPredicted RBP18.81■□□□□ 0.6
APOBEC3A-204ENST00000495988 RNF39Q9H2S5 420 aa18.81■□□□□ 0.6
APOBEC3A-204ENST00000495988 GPRC5CQ9NQ84 441 aa18.81■□□□□ 0.6
APOBEC3A-204ENST00000495988 HES2Q9Y543 173 aa18.81■□□□□ 0.6
APOBEC3A-204ENST00000495988 LRRIQ4A6NIV6 560 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 NRP1O14786 923 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 B4GALT5O43286 388 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 MLH1P40692 756 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 ITIH3Q06033 890 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 HFE2Q6ZVN8 426 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 NOSTRINQ8IVI9 506 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 MCPH1Q8NEM0 835 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 GAD1Q99259 594 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 APOL6Q9BWW8 343 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 ADAM7Q9H2U9 754 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 STK39Q9UEW8 545 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 CDH22Q9UJ99 828 aa18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 NOL7Q9UMY1 257 aaKnown RBP18.8■□□□□ 0.6
APOBEC3A-204ENST00000495988 ARL5CA6NH57 179 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 SSBP05455 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 EPCAMP16422 314 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 SP100P23497 879 aaPredicted RBP18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 RPA1P27694 616 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 POTEGQ6S5H5 508 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 CDR2LQ86X02 465 aaPredicted RBP18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 HACE1Q8IYU2 909 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 NXF3Q9H4D5 531 aaKnown RBP18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 DZANK1Q9NVP4 752 aa18.79■□□□□ 0.6
APOBEC3A-204ENST00000495988 INPPL1O15357 1258 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 OR1G1P47890 313 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 SCNN1GP51170 649 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 ZXDAP98168 799 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 RARS2Q5T160 578 aaKnown RBP18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 SLC27A1Q6PCB7 646 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 COLGALT2Q8IYK4 626 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 ZFP42Q96MM3 310 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 POMKQ9H5K3 350 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 GIT1Q9Y2X7 761 aa18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 TDRD15B5MCY1 1934 aaKnown RBP18.78■□□□□ 0.6
APOBEC3A-204ENST00000495988 A0A1B0GUA9 196 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 ARHGEF35A5YM69 484 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 NPTXRO95502 500 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 NBR1Q14596 966 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 HAUS3Q68CZ6 603 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 PADI6Q6TGC4 694 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 TRIM67Q6ZTA4 783 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 PPFIBP1Q86W92 1011 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 ZBTB8OSQ8IWT0 167 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 C12orf76Q8N812 135 aaPredicted RBP18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 SLC22A17Q8WUG5 538 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 PRIMPOLQ96LW4 560 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 RIPOR3Q96MK2 946 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 EMILIN2Q9BXX0 1053 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 MRPL17Q9NRX2 175 aaKnown RBP18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 PRMT7Q9NVM4 692 aaPredicted RBP18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 MARCH5Q9NX47 278 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 MIOSQ9NXC5 875 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 NR2E1Q9Y466 385 aa18.77■□□□□ 0.6
APOBEC3A-204ENST00000495988 TECTAO75443 2155 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 NR1I2O75469 434 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 SOD2P04179 222 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 URODP06132 367 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 WEE2P0C1S8 567 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 MUTP22033 750 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 AKAP5P24588 427 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 KLRC2P26717 231 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 CCT6AP40227 531 aaKnown RBP18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 MTHFRP42898 656 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 DSC1Q08554 894 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 CDCA2Q69YH5 1023 aaPredicted RBP18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 KANK3Q6NY19 840 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 CABP7Q86V35 215 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 MFSD14AQ96MC6 490 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 KLHL5Q96PQ7 755 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 LRWD1Q9UFC0 647 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 PARP2Q9UGN5 583 aa18.76■□□□□ 0.59
APOBEC3A-204ENST00000495988 TMEM221A6NGB7 291 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 SPDYE4A6NLX3 237 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 M0R296 226 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 C2CD2LO14523 706 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 CNPP09543 421 aaKnown RBP18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 CYP11B2P19099 503 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 U2AF2P26368 475 aaKnown RBP eCLIP18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 FXR2P51116 673 aaKnown RBP eCLIP18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 ATAT1Q5SQI0 421 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 KIAA1841Q6NSI8 718 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 ZBTB33Q86T24 672 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 C4orf32Q8N8J7 132 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 HERC2P3Q9BVR0 1158 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 C2orf40Q9H1Z8 148 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 FZD8Q9H461 694 aa18.75■□□□□ 0.59
APOBEC3A-204ENST00000495988 C2CD4DB7Z1M9 353 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms