RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 C4orf19Q8IY42 314 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 PRPF31Q8WWY3 499 aaKnown RBP9.82□□□□□ -0.84
SORT1-208ENST00000495777 PSPC1Q8WXF1 523 aaKnown RBP9.82□□□□□ -0.84
SORT1-208ENST00000495777 TMX3Q96JJ7 454 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 HERC2P3Q9BVR0 1158 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 MFSD1Q9H3U5 465 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 KCNK12Q9HB15 430 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 UBN1Q9NPG3 1134 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 MRPL17Q9NRX2 175 aaKnown RBP9.82□□□□□ -0.84
SORT1-208ENST00000495777 MARCH5Q9NX47 278 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 FAN1Q9Y2M0 1017 aa9.82□□□□□ -0.84
SORT1-208ENST00000495777 PTPRZ1P23471 2315 aaPredicted RBP9.82□□□□□ -0.84
SORT1-208ENST00000495777 DENND4AQ7Z401 1863 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 TBX3O15119 743 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 N4BP1O75113 896 aaKnown RBP9.81□□□□□ -0.84
SORT1-208ENST00000495777 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
SORT1-208ENST00000495777 XBP1P17861 261 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 DSC1Q08554 894 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 SPIRE1Q08AE8 756 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 LAMTOR4Q0VGL1 99 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 SCRN1Q12765 414 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 CUL4AQ13619 759 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 PCBP1Q15365 356 aaKnown RBP eCLIP9.81□□□□□ -0.84
SORT1-208ENST00000495777 INF2Q27J81 1249 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 CCDC105Q8IYK2 499 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 COLGALT2Q8IYK4 626 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 SMG8Q8ND04 991 aaKnown RBP9.81□□□□□ -0.84
SORT1-208ENST00000495777 CNNM3Q8NE01 707 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 HAS1Q92839 578 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 TMEM143Q96AN5 459 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 CEP170P1Q96L14 293 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 AIFM3Q96NN9 605 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 RPS6KC1Q96S38 1066 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 RXFP1Q9HBX9 757 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 WDR6Q9NNW5 1121 aaKnown RBP9.81□□□□□ -0.84
SORT1-208ENST00000495777 IGSF9Q9P2J2 1179 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 SSX2IPQ9Y2D8 614 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 RBM19Q9Y4C8 960 aaKnown RBP9.81□□□□□ -0.84
SORT1-208ENST00000495777 SPTBN4Q9H254 2564 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
SORT1-208ENST00000495777 TEX28O15482 410 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 ASAP2O43150 1006 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 PI15O43692 258 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 TSPAN1O60635 241 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 POMCP01189 267 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 SSBP05455 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
SORT1-208ENST00000495777 URODP06132 367 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 SRGAP2CP0DJJ0 459 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 PDCP20941 246 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 AXLP30530 894 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 YWHABP31946 246 aaKnown RBP9.8□□□□□ -0.84
SORT1-208ENST00000495777 POU5F1BQ06416 359 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 EMC2Q15006 297 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 EPHA7Q15375 998 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 KIAA0319Q5VV43 1072 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 TAS1R1Q7RTX1 841 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 FRMD5Q7Z6J6 570 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 NEK8Q86SG6 692 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 IFNLR1Q8IU57 520 aaPredicted RBP9.8□□□□□ -0.84
SORT1-208ENST00000495777 GPR65Q8IYL9 337 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 FLCNQ8NFG4 579 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 HDAC7Q8WUI4 952 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 TCP11Q8WWU5 503 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 NKD2Q969F2 451 aaPredicted RBP9.8□□□□□ -0.84
SORT1-208ENST00000495777 CCDC51Q96ER9 411 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 FAM193BQ96PV7 902 aaPredicted RBP9.8□□□□□ -0.84
SORT1-208ENST00000495777 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 LXNQ9BS40 222 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 PHF20Q9BVI0 1012 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 MAN1C1Q9NR34 630 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 CHST7Q9NS84 486 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 EPS15L1Q9UBC2 864 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 DPP7Q9UHL4 492 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 IPPQ9Y573 584 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 FAM186AA6NE01 2351 aa9.8□□□□□ -0.84
SORT1-208ENST00000495777 CACNA1AO00555 2505 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 ARL5CA6NH57 179 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 NARSO43776 548 aaKnown RBP9.79□□□□□ -0.84
SORT1-208ENST00000495777 GLUD1P00367 558 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 ADH1AP07327 375 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 ITGA4P13612 1032 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 PTENP60484 403 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 DSG1Q02413 1049 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 STK3Q13188 491 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 AMHR2Q16671 573 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 NOTUMQ6P988 496 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 OTUD6AQ7L8S5 288 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 SIX5Q8N196 739 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 FAM184AQ8NB25 1140 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 DTWD2Q8NBA8 298 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 RNF149Q8NC42 400 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 NXPE3Q969Y0 559 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 ZNF707Q96C28 371 aaPredicted RBP9.79□□□□□ -0.84
SORT1-208ENST00000495777 EIF2AQ9BY44 585 aaKnown RBP9.79□□□□□ -0.84
SORT1-208ENST00000495777 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 ZSWIM4Q9H7M6 989 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 XPNPEP1Q9NQW7 623 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 RGL1Q9NZL6 768 aa9.79□□□□□ -0.84
SORT1-208ENST00000495777 WNT16Q9UBV4 365 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms