RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 TNFRSF25Q93038 417 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
PTPN18-216ENST00000495400 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 SFXN1Q9H9B4 322 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 MRPL17Q9NRX2 175 aaKnown RBP16.43■□□□□ 0.22
PTPN18-216ENST00000495400 LIMD1Q9UGP4 676 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 C2orf16Q68DN1 1984 aa16.43■□□□□ 0.22
PTPN18-216ENST00000495400 INO80B-WBP1J3KQ70 363 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 INPPL1O15357 1258 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 TSPAN1O60635 241 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 SOD2P04179 222 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 CNPP09543 421 aaKnown RBP16.42■□□□□ 0.22
PTPN18-216ENST00000495400 NOTUMQ6P988 496 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
PTPN18-216ENST00000495400 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 HERC2P3Q9BVR0 1158 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 EIF2AQ9BY44 585 aaKnown RBP16.42■□□□□ 0.22
PTPN18-216ENST00000495400 CSRNP2Q9H175 543 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 SSX2IPQ9Y2D8 614 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 IPPQ9Y573 584 aa16.42■□□□□ 0.22
PTPN18-216ENST00000495400 ARL5CA6NH57 179 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 DGAT1O75907 488 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 ASGR2P07307 311 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 OR1G1P47890 313 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 CALCRLQ16602 461 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 FEZF2Q8TBJ5 459 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-216ENST00000495400 GAD1Q99259 594 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
PTPN18-216ENST00000495400 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-216ENST00000495400 PRG3Q9Y2Y8 225 aaPredicted RBP16.41■□□□□ 0.22
PTPN18-216ENST00000495400 PLXNA3P51805 1871 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 C2CD2LO14523 706 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 URODP06132 367 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 ARL2P36404 184 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 DSC1Q08554 894 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 CAPSQ13938 189 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 ME3Q16798 604 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 OTOP3Q7RTS5 596 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 TAS1R1Q7RTX1 841 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 ASAP3Q8TDY4 903 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
PTPN18-216ENST00000495400 RPS6KC1Q96S38 1066 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 MIOSQ9NXC5 875 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 HES2Q9Y543 173 aa16.4■□□□□ 0.22
PTPN18-216ENST00000495400 MTCL1Q9Y4B5 1905 aaKnown RBP16.4■□□□□ 0.22
PTPN18-216ENST00000495400 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 NR1I2O75469 434 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 LARGE1O95461 756 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 EFEMP2O95967 443 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 ADH1AP07327 375 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 ARF4P18085 180 aaPredicted RBP16.39■□□□□ 0.21
PTPN18-216ENST00000495400 MLH1P40692 756 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 TXKP42681 527 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 GLUD2P49448 558 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 SCNN1GP51170 649 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 AMHR2Q16671 573 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 RNF168Q8IYW5 571 aaPredicted RBP16.39■□□□□ 0.21
PTPN18-216ENST00000495400 ATOH1Q92858 354 aaPredicted RBP16.39■□□□□ 0.21
PTPN18-216ENST00000495400 APOL6Q9BWW8 343 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 TRIM6Q9C030 488 aaPredicted RBP16.39■□□□□ 0.21
PTPN18-216ENST00000495400 FAM86C1Q9NVL1 165 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 GIT1Q9Y2X7 761 aa16.39■□□□□ 0.21
PTPN18-216ENST00000495400 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-216ENST00000495400 NEMFO60524 1076 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN18-216ENST00000495400 GLRA2P23416 452 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 RARRES1P49788 294 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 TRIM29Q14134 588 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
PTPN18-216ENST00000495400 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
PTPN18-216ENST00000495400 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
PTPN18-216ENST00000495400 ZFP42Q96MM3 310 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 MTMR9Q96QG7 549 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 COLEC11Q9BWP8 271 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 RXFP1Q9HBX9 757 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 MAN1C1Q9NR34 630 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
PTPN18-216ENST00000495400 H0Y858 1186 aa16.37■□□□□ 0.21
PTPN18-216ENST00000495400 WNT7AO00755 349 aa16.37■□□□□ 0.21
PTPN18-216ENST00000495400 TEX28O15482 410 aa16.37■□□□□ 0.21
PTPN18-216ENST00000495400 DSG1Q02413 1049 aa16.37■□□□□ 0.21
PTPN18-216ENST00000495400 ASTLQ6HA08 431 aaPredicted RBP16.37■□□□□ 0.21
PTPN18-216ENST00000495400 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms